Guide to the Human Genome
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Name: DNAJC17 Sequence: fasta or formatted (304aa) NCBI GI: 8922563
Description:

DnaJ (Hsp40) homolog, subfamily C, member 17

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         30           3
 C cysteine            0.7          2           1
 D aspartate           4.9         15           1
 E glutamate          12.8         39           5
 F phenylalanine       0.7          2           1
 G glycine             4.9         15           2
 H histidine           1.0          3           1
 I isoleucine          2.0          6           1
 K lysine             10.2         31           2
 L leucine            11.5         35           2
 M methionine          2.0          6           2
 N asparagine          2.0          6           1
 P proline             3.0          9           2
 Q glutamine           8.9         27           2
 R arginine            8.6         26           1
 S serine              5.6         17           2
 T threonine           3.3         10           1
 V valine              5.6         17           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 17 
LOC645314             0.258   PREDICTED: similar to hCG1642995 
LOC645314             0.258   PREDICTED: similar to DnaJ (Hsp40) homolog, subfami...
LOC645314             0.256   PREDICTED: similar to hCG1642995 
DNAJC12               0.096   J domain containing protein 1 isoform a 
DNAJC5                0.087   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJB11               0.084   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJC5B               0.084   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJC12               0.082   J domain containing protein 1 isoform b 
DNAJB6                0.080   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.080   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJA3                0.078   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.078   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJB4                0.077   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJC10               0.073   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJA1                0.071   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJC14               0.071   dopamine receptor interacting protein 
DNAJB8                0.071   DnaJ homolog, subfamily B, member 8 
DNAJB3                0.071   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJA4                0.068   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJC8                0.066   DnaJ (Hsp40) homolog, subfamily C, member 8 
DNAJB2                0.066   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.066   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJA4                0.066   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB5                0.066   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.066   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.066   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJC21               0.066   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.066   DnaJ homology subfamily A member 5 isoform 2 
DNAJB7                0.064   DnaJ (Hsp40) homolog, subfamily B, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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