Guide to the Human Genome
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Search of human proteins with 33469974

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33469974 activating transcription factor 4 [Homo sapiens]
         (351 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33469974 activating transcription factor 4 [Homo sapiens]          707   0.0  
gi|33469976 activating transcription factor 4 [Homo sapiens]          707   0.0  
gi|12597625 activating transcription factor 5 [Homo sapiens]           94   2e-19
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap...    49   7e-06
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa...    49   7e-06
gi|8924246 basic leucine zipper transcription factor, ATF-like 3...    45   1e-04
gi|59938776 cAMP responsive element binding protein 5 isoform de...    45   1e-04
gi|59938774 cAMP responsive element binding protein 5 isoform be...    45   1e-04
gi|59938772 cAMP responsive element binding protein 5 isoform ga...    45   1e-04
gi|59938770 cAMP responsive element binding protein 5 isoform al...    45   1e-04
gi|22538422 activating transcription factor 2 [Homo sapiens]           44   3e-04
gi|5453563 basic leucine zipper transcription factor, ATF-like [...    42   6e-04
gi|52145312 hypothetical protein LOC118611 [Homo sapiens]              42   6e-04
gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]       42   0.001
gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]       42   0.001
gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]       42   0.001
gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]        42   0.001
gi|4504421 hepatic leukemia factor [Homo sapiens]                      41   0.001
gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo sa...    41   0.001
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is...    41   0.002
gi|4885245 FOS-like antigen 2 [Homo sapiens]                           40   0.002
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ...    40   0.002
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]        40   0.004
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ...    39   0.005
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2...    39   0.005
gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]    39   0.007
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]      39   0.007
gi|33457316 pleckstrin homology domain containing, family O memb...    39   0.007
gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog ...    38   0.012
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    38   0.012

>gi|33469974 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score =  707 bits (1825), Expect = 0.0
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
           MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
Sbjct: 1   MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60

Query: 61  WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
           WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
Sbjct: 61  WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120

Query: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
           DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
Sbjct: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180

Query: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
           ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
Sbjct: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240

Query: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
           SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
Sbjct: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300

Query: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
           AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
Sbjct: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351


>gi|33469976 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score =  707 bits (1825), Expect = 0.0
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
           MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
Sbjct: 1   MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60

Query: 61  WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
           WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
Sbjct: 61  WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120

Query: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
           DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
Sbjct: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180

Query: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
           ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
Sbjct: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240

Query: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
           SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
Sbjct: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300

Query: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
           AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
Sbjct: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351


>gi|12597625 activating transcription factor 5 [Homo sapiens]
          Length = 282

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 8/97 (8%)

Query: 257 RPKPYDPPGEKMVA-----AKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECK 311
           +P P  PP    +A     A  +G   D+K KK +QNK+AA RYRQ+KRAE EAL GEC+
Sbjct: 185 QPPPPSPPQPSRLAPYPHPATTRG---DRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241

Query: 312 ELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKK 348
            LE +N  LKERA+S+ +EIQY+KDL+ EV KAR ++
Sbjct: 242 GLEARNRELKERAESVEREIQYVKDLLIEVYKARSQR 278


>gi|4502263 activating transcription factor 3 isoform 1 [Homo
           sapiens]
          Length = 181

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
           P G  +  A+V  E+ ++K ++ E+NK AA + R KK+ + E L  E ++LE  N  LK 
Sbjct: 71  PLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKA 130

Query: 323 RADSLAKEIQYL 334
           + + L  E Q+L
Sbjct: 131 QIEELKNEKQHL 142


>gi|71902536 activating transcription factor 3 isoform 1 [Homo
           sapiens]
          Length = 181

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
           P G  +  A+V  E+ ++K ++ E+NK AA + R KK+ + E L  E ++LE  N  LK 
Sbjct: 71  PLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKA 130

Query: 323 RADSLAKEIQYL 334
           + + L  E Q+L
Sbjct: 131 QIEELKNEKQHL 142


>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
           [Homo sapiens]
          Length = 127

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 243 NRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAE 302
           ++ LP+ G +   +   P + P  +    +   E  D+K+++ E+N+ AA R R+K+  +
Sbjct: 2   SQGLPAAGSVLQRSVAAPGNQPQPQ--PQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQK 59

Query: 303 QEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRK 343
            + L  E + LE++N  L+     L +E+++L + ++E  K
Sbjct: 60  ADKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEK 100


>gi|59938776 cAMP responsive element binding protein 5 isoform delta
           [Homo sapiens]
          Length = 369

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
           PQ   +++ P  +  S +   P  +  SP H P   G+  +  P+   +  +   +P  P
Sbjct: 164 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 222

Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
            G +    +V  E  D++ +K +E+N+ AATR RQK++    +L  + +EL + N  L+ 
Sbjct: 223 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 280

Query: 323 RADSLAKEIQYLKDLI 338
               L  E+  LK L+
Sbjct: 281 EVSMLKNEVAQLKQLL 296


>gi|59938774 cAMP responsive element binding protein 5 isoform beta
           [Homo sapiens]
          Length = 501

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
           PQ   +++ P  +  S +   P  +  SP H P   G+  +  P+   +  +   +P  P
Sbjct: 296 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 354

Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
            G +    +V  E  D++ +K +E+N+ AATR RQK++    +L  + +EL + N  L+ 
Sbjct: 355 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 412

Query: 323 RADSLAKEIQYLKDLI 338
               L  E+  LK L+
Sbjct: 413 EVSMLKNEVAQLKQLL 428


>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
           [Homo sapiens]
          Length = 475

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
           PQ   +++ P  +  S +   P  +  SP H P   G+  +  P+   +  +   +P  P
Sbjct: 270 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 328

Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
            G +    +V  E  D++ +K +E+N+ AATR RQK++    +L  + +EL + N  L+ 
Sbjct: 329 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 386

Query: 323 RADSLAKEIQYLKDLI 338
               L  E+  LK L+
Sbjct: 387 EVSMLKNEVAQLKQLL 402


>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
           [Homo sapiens]
          Length = 508

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
           PQ   +++ P  +  S +   P  +  SP H P   G+  +  P+   +  +   +P  P
Sbjct: 303 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 361

Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
            G +    +V  E  D++ +K +E+N+ AATR RQK++    +L  + +EL + N  L+ 
Sbjct: 362 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 419

Query: 323 RADSLAKEIQYLKDLI 338
               L  E+  LK L+
Sbjct: 420 EVSMLKNEVAQLKQLL 435


>gi|22538422 activating transcription factor 2 [Homo sapiens]
          Length = 505

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 33/191 (17%)

Query: 154 VAPFTFLQPLPLSPGVLSSTPDHSFSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDT 213
           V P T +  +P  PG  S  P               + + K    A +      +   DT
Sbjct: 249 VRPVTMVPSVPGIPGPSSPQP--------------VQSEAKMRLKAALTQQHPPVTNGDT 294

Query: 214 PSDNDSGICMS------PESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDPPGEK 267
              + SG+  +      P+S       +  T  SP  + P      G  R    + P EK
Sbjct: 295 VKGHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEK 354

Query: 268 MVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSL 327
                        + K +E+N+ AA+R RQK++   ++L  + ++L   N  L+     L
Sbjct: 355 -------------RRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLL 401

Query: 328 AKEIQYLKDLI 338
             E+  LK L+
Sbjct: 402 RNEVAQLKQLL 412


>gi|5453563 basic leucine zipper transcription factor, ATF-like
           [Homo sapiens]
          Length = 125

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 21/76 (27%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
           PPG++  +  V+      ++++ E+N+ AA + RQ++  + + L  E ++LEK+N AL++
Sbjct: 17  PPGKQDSSDDVR------RVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRK 70

Query: 323 RADSLAKEIQYLKDLI 338
               L +E++Y   ++
Sbjct: 71  EIKQLTEELKYFTSVL 86


>gi|52145312 hypothetical protein LOC118611 [Homo sapiens]
          Length = 699

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 17/137 (12%)

Query: 124 APLVQETNKQPPQTVNPIGH-------LPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDH 176
           AP V++   +P +   PIG        L   L++P +    +FL+P  L PG L    D 
Sbjct: 437 APPVEQ---KPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDV 493

Query: 177 SFSLELGSEVDITEGDRKPDYTA--YVAMIPQCIKEED--TPSDNDSGICMSPESYLGSP 232
             SL+  + V I     K DYT    V  I +C K ED  TP  + +    +P    GSP
Sbjct: 494 CASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSP 553

Query: 233 ---QHSPSTRGSPNRSL 246
              +    ++ +P RSL
Sbjct: 554 GLSEDCSESQQTPARSL 570


>gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]
          Length = 174

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
           E+ +++ ++ E+NK AA R R KK+   E L  E + LE  N  LK + + L +E Q L
Sbjct: 81  EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 139


>gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
           E+ +++ ++ E+NK AA R R KK+   E L  E + LE  N  LK + + L +E Q L
Sbjct: 70  EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128


>gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
           E+ +++ ++ E+NK AA R R KK+   E L  E + LE  N  LK + + L +E Q L
Sbjct: 70  EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128


>gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]
          Length = 163

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
           E+ +++ ++ E+NK AA R R KK+   E L  E + LE  N  LK + + L +E Q L
Sbjct: 70  EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128


>gi|4504421 hepatic leukemia factor [Homo sapiens]
          Length = 295

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 22/155 (14%)

Query: 214 PSDNDSGICMSPESYLGSPQHSPS-----TRGSPNRSLPSPGVLCGSARP--KPYDPPGE 266
           PS N     + P   L + +++PS     T   P    P P  L  S+ P  + +DP   
Sbjct: 139 PSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRKR 198

Query: 267 KMVAAKVKGEKLDKKLKKM---------------EQNKTAATRYRQKKRAEQEALTGECK 311
           K    ++K + + KK +K+                +N  AA R R  +R ++  +     
Sbjct: 199 KFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRAS 258

Query: 312 ELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
            LEK+N AL++    L KE+   K+++ +     G
Sbjct: 259 FLEKENSALRQEVADLRKELGKCKNILAKYEARHG 293


>gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo
           sapiens]
          Length = 304

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 251 VLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGEC 310
           VL  +A    YD   +    A  + +KLD+K KK++ +  A  R  Q + +E+E  +   
Sbjct: 62  VLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRST 121

Query: 311 KELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKK 348
           + LE++ E L+E      +E Q L  + E++R+ R ++
Sbjct: 122 RTLEQEIERLREEGSRQLEEQQRL--IREQIRQERDQR 157


>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
           isoform 1 [Homo sapiens]
          Length = 338

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%)

Query: 201 VAMIPQCIKEEDTPSDNDSGICMSPESYLG-SPQHSPSTRGSPNRSLPSPGVLCGSARPK 259
           +A  P  +   D P  + S   MS  S  G S    PST G+   S P P      AR +
Sbjct: 87  LASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSGGPSTSGTT--SGPGPA---RPARAR 141

Query: 260 PYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEA 319
           P  P  E +       E+ +K+  + E+NK AA + R ++R   + L  E  +LE++   
Sbjct: 142 PRRPREETLTP-----EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAE 196

Query: 320 LKERADSLAKEIQYLK 335
           L+     L KE + L+
Sbjct: 197 LESEIAELQKEKERLE 212


>gi|4885245 FOS-like antigen 2 [Homo sapiens]
          Length = 326

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 225 PESYLGSPQHSPSTRGSPNR-SLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLK 283
           P S+  SP   P     P   +LP PGV+            G +    ++  E+ +K+  
Sbjct: 77  PRSHPYSPL--PGLASVPGHMALPRPGVIKTIGTTV-----GRRRRDEQLSPEEEEKRRI 129

Query: 284 KMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLI 338
           + E+NK AA + R ++R   E L  E +ELE++   L++    L KE + L+ ++
Sbjct: 130 RRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFML 184


>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
           sapiens]
          Length = 956

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)

Query: 235 SPSTRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKG-------------EKLDKK 281
           SPS+  SP    P+P     S  P P   P  ++    VKG             E+L K+
Sbjct: 289 SPSSTSSPEGP-PAPPKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQERLGKQ 347

Query: 282 LKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEV 341
           LK   + +       + KRA++EA   + +E E K +  +E+ +   KE    + L EE 
Sbjct: 348 LKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEER 407

Query: 342 RKAR 345
           RK R
Sbjct: 408 RKER 411


>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
          Length = 269

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)

Query: 205 PQCIKEEDTPSDNDSGICMSPE----------SYLGSPQHSPSTRGSPNRSLPSPGVLCG 254
           P+ +K E    D D+   + P           S   + Q +P T   P RS P      G
Sbjct: 116 PRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQPTPPTSPEPPRSSPRQTPAPG 175

Query: 255 SARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELE 314
            AR K     G    + + +        ++ E+N  A  + R K +   + +  +  EL 
Sbjct: 176 PAREKSAGKRGPDRGSPEYR--------QRRERNNIAVRKSRDKAKRRNQEMQQKLVELS 227

Query: 315 KKNEALKERADSLAKEIQYLKDLIEEV 341
            +NE L +R + L +++  L+   +++
Sbjct: 228 AENEKLHQRVEQLTRDLAGLRQFFKQL 254


>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
           [Homo sapiens]
          Length = 1046

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 266 EKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERAD 325
           E+ +  K   E L  KL K ++  TA T   +  RA+  AL  +CK  EKK +AL +   
Sbjct: 816 EETIRTKETVEGLQDKLNKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLKEKR 875

Query: 326 SLAKEIQ 332
            L  E++
Sbjct: 876 RLEAELE 882



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 270 AAKVKGEK-LDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLA 328
           A K+ G   L + LK+ +Q+       R  +RAE    T    E+EK+   LK + +   
Sbjct: 348 ARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYV 407

Query: 329 KE----IQYLKDLIEEVRKAR 345
            E    +Q  + L+E VRK +
Sbjct: 408 AEAEEKLQRARLLVESVRKEK 428


>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
           [Homo sapiens]
          Length = 1011

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 266 EKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERAD 325
           E+ +  K   E L  KL K ++  TA T   +  RA+  AL  +CK  EKK +AL +   
Sbjct: 781 EETIRTKETVEGLQDKLNKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLKEKR 840

Query: 326 SLAKEIQ 332
            L  E++
Sbjct: 841 RLEAELE 847



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 270 AAKVKGEK-LDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLA 328
           A K+ G   L + LK+ +Q+       R  +RAE    T    E+EK+   LK + +   
Sbjct: 348 ARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYV 407

Query: 329 KE----IQYLKDLIEEVRKAR 345
            E    +Q  + L+E VRK +
Sbjct: 408 AEAEEKLQRARLLVESVRKEK 428


>gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]
          Length = 273

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
           P P  L  S+ P  + ++P   K     +K + + KK KK+               ++N 
Sbjct: 155 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 214

Query: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
            AA R R  +R ++  +T     LEK+N AL+     L KE+   K ++ +     G
Sbjct: 215 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 271


>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
          Length = 303

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
           P P  L  S+ P  + ++P   K     +K + + KK KK+               ++N 
Sbjct: 185 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 244

Query: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
            AA R R  +R ++  +T     LEK+N AL+     L KE+   K ++ +     G
Sbjct: 245 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 301


>gi|33457316 pleckstrin homology domain containing, family O member
           2 [Homo sapiens]
          Length = 490

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 45/178 (25%)

Query: 122 LFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSLE 181
           +FAP    +  QP +T  P+  +P   TKP       FL P   SPG    TP       
Sbjct: 184 VFAPSNHVSEAQPRETPRPL--MPP--TKP-------FLAPETTSPGDRVETP------- 225

Query: 182 LGSEVDITEGDRKPD-YTAYVAMIPQCIKEEDTPSDNDSGICMSPESYL----------G 230
                    G+R P   +A   + P+  ++ +TP++ DSG    P S L           
Sbjct: 226 --------VGERAPTPVSASSEVSPESQEDSETPAEEDSGSEQPPNSVLPDKLKVSWENP 277

Query: 231 SPQHSPSTRGSPNRSLPSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKME 286
           SPQ +P+   +     P       + R   KP  PP       K+  EKL   + +M+
Sbjct: 278 SPQEAPAAESAEPSQAPCSETSEAAPREGGKPPTPP------PKILSEKLKASMGEMQ 329


>gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog
           [Homo sapiens]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 22/80 (27%), Positives = 42/80 (52%)

Query: 265 GEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERA 324
           G +    ++  E+ +K+  + E+NK AA + R ++R   + L  E  +LE +  AL+   
Sbjct: 124 GRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEI 183

Query: 325 DSLAKEIQYLKDLIEEVRKA 344
            +L KE + L+ ++   R A
Sbjct: 184 ANLLKEKEKLEFILAAHRPA 203


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
           [Homo sapiens]
          Length = 2059

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 185 EVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGIC-MSPESYLGSPQHSPSTRGSPN 243
           E +  EGD + +     A       +ED   D+D G+    P    G  +HSP       
Sbjct: 22  EEEEEEGDEEEEEEVEAA-------DEDDEEDDDEGVLGRGPGHDRGRDRHSPPGCHLFP 74

Query: 244 RSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQ 303
              P P  L     P P D    +++ + +  +K  +  KK ++NK    R R+K+ +E+
Sbjct: 75  PPPPPPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKPGKPRKRKKRDSEE 134

Query: 304 EALTGECKELEKKNEA 319
           E    E  E  +K+E+
Sbjct: 135 E-FGSERDEYREKSES 149


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.130    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,515,917
Number of Sequences: 37866
Number of extensions: 865112
Number of successful extensions: 5401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 4252
Number of HSP's gapped (non-prelim): 1404
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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