Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLCB4 Sequence: fasta or formatted (1175aa) NCBI GI: 33469939
Description:

phospholipase C beta 4 isoform b

Referenced in:

Inositol Pathways
Lipid Metabolism

Other entries for this name:
alt prot [1194aa] phospholipase C beta 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         69           2
 C cysteine            1.7         20           1
 D aspartate           5.4         64           2
 E glutamate           9.3        109           3
 F phenylalanine       4.1         48           2
 G glycine             4.8         56           2
 H histidine           2.5         29           1
 I isoleucine          5.5         65           2
 K lysine              9.7        114           3
 L leucine             8.8        103           3
 M methionine          3.3         39           2
 N asparagine          4.9         57           2
 P proline             4.0         47           1
 Q glutamine           5.0         59           2
 R arginine            4.3         51           2
 S serine              6.8         80           3
 T threonine           4.8         56           3
 V valine              5.4         64           2
 W tryptophan          0.7          8           1
 Y tyrosine            3.1         37           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C beta 4 isoform b 
PLCB4                 0.982   phospholipase C beta 4 isoform a 
PLCB1                 0.342   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.341   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB3                 0.306   phospholipase C beta 3 
PLCB2                 0.285   phospholipase C, beta 2 
PLCD3                 0.145   phospholipase C delta 3 
PLCD4                 0.144   phospholipase C, delta 4 
PLCD1                 0.144   phospholipase C, delta 1 isoform 2 
PLCD1                 0.144   phospholipase C, delta 1 isoform 1 
PLCH2                 0.139   phospholipase C, eta 2 
PLCL2                 0.133   phospholipase C-like 2 isoform 1 
PLCL2                 0.133   phospholipase C-like 2 isoform 2 
PLCH1                 0.131   phospholipase C eta 1 isoform c 
PLCH1                 0.131   phospholipase C eta 1 isoform a 
PLCH1                 0.131   phospholipase C eta 1 isoform b 
PLCL1                 0.130   phospholipase C-like 1 isoform a 
PLCL1                 0.130   phospholipase C-like 1 isoform b 
PLCZ1                 0.117   phospholipase C, zeta 1 
PLCE1                 0.077   phospholipase C, epsilon 1 
PLCG1                 0.064   phospholipase C, gamma 1 isoform a 
PLCG1                 0.064   phospholipase C, gamma 1 isoform b 
PLCG2                 0.064   phospholipase C, gamma 2 
LOC645202             0.017   PREDICTED: hypothetical protein LOC645202 
GOLGA4                0.016   golgi autoantigen, golgin subfamily a, 4 
CDC42BPB              0.015   CDC42-binding protein kinase beta 
CENPE                 0.015   centromere protein E 
AZI1                  0.014   5-azacytidine induced 1 isoform b 
CGNL1                 0.014   cingulin-like 1 
AZI1                  0.014   5-azacytidine induced 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press