Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLCD3 Sequence: fasta or formatted (789aa) NCBI GI: 19115964
Description:

phospholipase C delta 3

Referenced in:

Inositol Pathways
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         69           3
 C cysteine            2.0         16           1
 D aspartate           4.8         38           2
 E glutamate           8.1         64           6
 F phenylalanine       3.4         27           2
 G glycine             5.7         45           2
 H histidine           3.2         25           1
 I isoleucine          3.3         26           1
 K lysine              3.5         28           2
 L leucine            11.5         91           2
 M methionine          2.2         17           2
 N asparagine          3.3         26           2
 P proline             6.5         51           2
 Q glutamine           5.8         46           2
 R arginine            8.6         68           2
 S serine              6.2         49           3
 T threonine           4.3         34           2
 V valine              5.1         40           2
 W tryptophan          1.0          8           1
 Y tyrosine            2.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C delta 3 
PLCD1                 0.467   phospholipase C, delta 1 isoform 1 
PLCD1                 0.466   phospholipase C, delta 1 isoform 2 
PLCD4                 0.437   phospholipase C, delta 4 
PLCL2                 0.271   phospholipase C-like 2 isoform 1 
PLCL2                 0.271   phospholipase C-like 2 isoform 2 
PLCZ1                 0.261   phospholipase C, zeta 1 
PLCL1                 0.252   phospholipase C-like 1 isoform a 
PLCL1                 0.252   phospholipase C-like 1 isoform b 
PLCB4                 0.214   phospholipase C beta 4 isoform a 
PLCB4                 0.214   phospholipase C beta 4 isoform b 
PLCB2                 0.196   phospholipase C, beta 2 
PLCB1                 0.179   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.179   phosphoinositide-specific phospholipase C beta 1 iso...
PLCH2                 0.178   phospholipase C, eta 2 
PLCH1                 0.172   phospholipase C eta 1 isoform c 
PLCH1                 0.172   phospholipase C eta 1 isoform a 
PLCH1                 0.172   phospholipase C eta 1 isoform b 
PLCG1                 0.130   phospholipase C, gamma 1 isoform a 
PLCG1                 0.130   phospholipase C, gamma 1 isoform b 
PLCG2                 0.130   phospholipase C, gamma 2 
PLCB3                 0.102   phospholipase C beta 3 
PLCE1                 0.100   phospholipase C, epsilon 1 
PRKCB                 0.015   protein kinase C, beta isoform 1 
PRKCB                 0.015   protein kinase C, beta isoform 2 
SYT7                  0.013   synaptotagmin VII 
PRKCA                 0.012   protein kinase C, alpha 
PRKCG                 0.012   protein kinase C, gamma 
MYOF                  0.011   myoferlin isoform a 
SENP3                 0.011   SUMO1/sentrin/SMT3 specific protease 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press