Guide to the Human Genome
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Name: PLCB3 Sequence: fasta or formatted (1234aa) NCBI GI: 11386139
Description:

phospholipase C beta 3

Referenced in:

Inositol Pathways
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         88           2
 C cysteine            1.1         14           1
 D aspartate           5.3         66           2
 E glutamate           9.4        116           5
 F phenylalanine       3.4         42           2
 G glycine             5.9         73           2
 H histidine           1.5         18           1
 I isoleucine          3.6         44           1
 K lysine              5.6         69           2
 L leucine            10.9        135           2
 M methionine          2.1         26           1
 N asparagine          3.8         47           1
 P proline             6.6         81           2
 Q glutamine           5.8         72           3
 R arginine            7.5         93           2
 S serine              7.4         91           2
 T threonine           4.7         58           2
 V valine              5.3         66           2
 W tryptophan          0.6          7           1
 Y tyrosine            2.3         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C beta 3 
PLCB1                 0.529   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.521   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB2                 0.405   phospholipase C, beta 2 
PLCB4                 0.295   phospholipase C beta 4 isoform a 
PLCB4                 0.294   phospholipase C beta 4 isoform b 
PLCD4                 0.123   phospholipase C, delta 4 
PLCH2                 0.119   phospholipase C, eta 2 
PLCD1                 0.110   phospholipase C, delta 1 isoform 2 
PLCD1                 0.110   phospholipase C, delta 1 isoform 1 
PLCH1                 0.107   phospholipase C eta 1 isoform c 
PLCH1                 0.107   phospholipase C eta 1 isoform a 
PLCH1                 0.107   phospholipase C eta 1 isoform b 
PLCD3                 0.066   phospholipase C delta 3 
PLCL1                 0.066   phospholipase C-like 1 isoform a 
PLCL1                 0.066   phospholipase C-like 1 isoform b 
PLCL2                 0.064   phospholipase C-like 2 isoform 1 
PLCL2                 0.064   phospholipase C-like 2 isoform 2 
PLCZ1                 0.062   phospholipase C, zeta 1 
PLCG1                 0.058   phospholipase C, gamma 1 isoform a 
PLCG1                 0.058   phospholipase C, gamma 1 isoform b 
PLCE1                 0.056   phospholipase C, epsilon 1 
PLCG2                 0.053   phospholipase C, gamma 2 
MAP7D1                0.017   MAP7 domain containing 1 
CEP164                0.016   centrosomal protein 164kDa 
MAP7                  0.014   microtubule-associated protein 7 
TCHH                  0.014   trichohyalin 
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
MYH9                  0.014   myosin, heavy polypeptide 9, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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