Guide to the Human Genome
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Name: PLCB4 Sequence: fasta or formatted (1194aa) NCBI GI: 33469933
Description:

phospholipase C beta 4 isoform a

Referenced in:

Inositol Pathways
Lipid Metabolism

Other entries for this name:
alt prot [1175aa] phospholipase C beta 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         70           2
 C cysteine            1.8         21           1
 D aspartate           5.5         66           2
 E glutamate           9.0        108           3
 F phenylalanine       4.0         48           2
 G glycine             5.1         61           2
 H histidine           2.5         30           1
 I isoleucine          5.5         66           2
 K lysine              9.5        114           3
 L leucine             8.8        105           3
 M methionine          3.1         37           2
 N asparagine          5.0         60           2
 P proline             3.9         47           1
 Q glutamine           5.1         61           2
 R arginine            4.2         50           2
 S serine              7.2         86           3
 T threonine           4.8         57           3
 V valine              5.2         62           1
 W tryptophan          0.7          8           1
 Y tyrosine            3.1         37           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C beta 4 isoform a 
PLCB4                 0.966   phospholipase C beta 4 isoform b 
PLCB1                 0.335   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.335   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB3                 0.302   phospholipase C beta 3 
PLCB2                 0.280   phospholipase C, beta 2 
PLCD3                 0.142   phospholipase C delta 3 
PLCD4                 0.141   phospholipase C, delta 4 
PLCD1                 0.141   phospholipase C, delta 1 isoform 2 
PLCD1                 0.141   phospholipase C, delta 1 isoform 1 
PLCH2                 0.136   phospholipase C, eta 2 
PLCL2                 0.131   phospholipase C-like 2 isoform 1 
PLCL2                 0.131   phospholipase C-like 2 isoform 2 
PLCH1                 0.129   phospholipase C eta 1 isoform c 
PLCH1                 0.129   phospholipase C eta 1 isoform a 
PLCH1                 0.129   phospholipase C eta 1 isoform b 
PLCL1                 0.128   phospholipase C-like 1 isoform a 
PLCL1                 0.128   phospholipase C-like 1 isoform b 
PLCZ1                 0.115   phospholipase C, zeta 1 
PLCE1                 0.076   phospholipase C, epsilon 1 
PLCG1                 0.063   phospholipase C, gamma 1 isoform a 
PLCG1                 0.063   phospholipase C, gamma 1 isoform b 
PLCG2                 0.062   phospholipase C, gamma 2 
GOLGA4                0.016   golgi autoantigen, golgin subfamily a, 4 
LOC645202             0.014   PREDICTED: hypothetical protein LOC645202 
CDC42BPB              0.014   CDC42-binding protein kinase beta 
CALD1                 0.014   caldesmon 1 isoform 1 
AZI1                  0.014   5-azacytidine induced 1 isoform a 
AZI1                  0.013   5-azacytidine induced 1 isoform b 
CEP250                0.012   centrosomal protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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