Guide to the Human Genome
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Name: CDC42BPB Sequence: fasta or formatted (1711aa) NCBI GI: 115527097
Description:

CDC42-binding protein kinase beta

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        116           2
 C cysteine            2.0         35           1
 D aspartate           5.6         96           3
 E glutamate           9.8        167           3
 F phenylalanine       3.0         52           2
 G glycine             4.5         77           2
 H histidine           2.6         44           2
 I isoleucine          3.9         66           2
 K lysine              7.0        120           3
 L leucine            11.0        188           3
 M methionine          2.5         42           1
 N asparagine          3.2         54           1
 P proline             5.0         85           2
 Q glutamine           5.1         88           2
 R arginine            6.7        115           2
 S serine              8.0        137           3
 T threonine           4.0         68           2
 V valine              6.4        109           2
 W tryptophan          0.9         16           2
 Y tyrosine            2.1         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDC42-binding protein kinase beta 
CDC42BPA              0.616   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.531   CDC42-binding protein kinase alpha isoform A 
CDC42BPG              0.364   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
DMPK                  0.145   myotonic dystrophy protein kinase isoform 4 
DMPK                  0.145   myotonic dystrophy protein kinase isoform 3 
DMPK                  0.143   myotonic dystrophy protein kinase isoform 2 
ROCK1                 0.136   Rho-associated, coiled-coil containing protein kinase...
ROCK2                 0.130   Rho-associated, coiled-coil containing protein kinas...
DMPK                  0.129   myotonic dystrophy protein kinase isoform 1 
CIT                   0.113   citron 
STK38L                0.083   serine/threonine kinase 38 like 
SGK1                  0.053   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.053   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.053   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.053   serum/glucocorticoid regulated kinase 1 isoform 2 [...
RPS6KA6               0.053   ribosomal protein S6 kinase polypeptide 6 
PRKACA                0.053   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.053   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACB                0.053   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.053   cAMP-dependent protein kinase catalytic subunit beta...
SGK2                  0.053   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.053   serum/glucocorticoid regulated kinase 2 isoform beta...
RPS6KA5               0.052   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA5               0.052   ribosomal protein S6 kinase, polypeptide 5 isoform a...
AKT2                  0.052   AKT2 kinase 
AKT1                  0.052   AKT1 kinase 
AKT1                  0.052   AKT1 kinase 
AKT1                  0.052   AKT1 kinase 
PRKCQ                 0.052   protein kinase C, theta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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