Guide to the Human Genome
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Name: PLCL1 Sequence: fasta or formatted (997aa) NCBI GI: 167900450
Description:

phospholipase C-like 1 isoform b

Referenced in:

Inositol Pathways
Lipid Metabolism

Other entries for this name:
alt prot [1095aa] phospholipase C-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         56           2
 C cysteine            2.8         28           1
 D aspartate           5.7         57           3
 E glutamate           8.4         84           3
 F phenylalanine       4.3         43           2
 G glycine             5.2         52           3
 H histidine           1.5         15           1
 I isoleucine          7.0         70           2
 K lysine              7.3         73           2
 L leucine             9.5         95           2
 M methionine          3.3         33           2
 N asparagine          5.2         52           2
 P proline             4.4         44           2
 Q glutamine           4.5         45           2
 R arginine            4.6         46           2
 S serine              7.6         76           3
 T threonine           4.0         40           2
 V valine              5.2         52           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.9         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C-like 1 isoform b 
PLCL1                 1.000   phospholipase C-like 1 isoform a 
PLCL2                 0.683   phospholipase C-like 2 isoform 1 
PLCL2                 0.683   phospholipase C-like 2 isoform 2 
PLCD4                 0.230   phospholipase C, delta 4 
PLCD1                 0.223   phospholipase C, delta 1 isoform 2 
PLCD1                 0.223   phospholipase C, delta 1 isoform 1 
PLCZ1                 0.208   phospholipase C, zeta 1 
PLCD3                 0.200   phospholipase C delta 3 
PLCH2                 0.164   phospholipase C, eta 2 
PLCH1                 0.159   phospholipase C eta 1 isoform c 
PLCH1                 0.159   phospholipase C eta 1 isoform a 
PLCH1                 0.157   phospholipase C eta 1 isoform b 
PLCB1                 0.155   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.155   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB4                 0.153   phospholipase C beta 4 isoform a 
PLCB4                 0.153   phospholipase C beta 4 isoform b 
PLCB2                 0.129   phospholipase C, beta 2 
PLCG2                 0.088   phospholipase C, gamma 2 
PLCG1                 0.081   phospholipase C, gamma 1 isoform a 
PLCG1                 0.081   phospholipase C, gamma 1 isoform b 
PLCB3                 0.080   phospholipase C beta 3 
PLCE1                 0.069   phospholipase C, epsilon 1 
CC2D1B                0.009   coiled-coil and C2 domain containing 1B 
PLA2G4A               0.009   cytosolic phospholipase A2, group IVA 
DOC2A                 0.009   double C2-like domains, alpha 
RASA3                 0.009   RAS p21 protein activator 3 
SYT1                  0.008   synaptotagmin I 
SYT1                  0.008   synaptotagmin I 
SYT1                  0.008   synaptotagmin I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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