Guide to the Human Genome
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Name: PLCH1 Sequence: fasta or formatted (1655aa) NCBI GI: 57863298
Description:

phospholipase C eta 1 isoform b

Referenced in:

Calmodulin and Calcium
Inositol Pathways
Lipid Metabolism

Other entries for this name:
alt prot [1693aa] phospholipase C eta 1 isoform a
alt prot [1002aa] phospholipase C eta 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         74           2
 C cysteine            2.2         36           2
 D aspartate           6.0         99           3
 E glutamate           6.5        108           2
 F phenylalanine       3.4         56           1
 G glycine             6.3        105           3
 H histidine           3.0         50           2
 I isoleucine          4.5         74           2
 K lysine              7.9        130           2
 L leucine             9.4        155           4
 M methionine          1.9         31           2
 N asparagine          4.9         81           2
 P proline             4.9         81           2
 Q glutamine           5.0         82           3
 R arginine            4.9         81           3
 S serine              9.9        164           5
 T threonine           6.0         99           2
 V valine              5.9         98           2
 W tryptophan          0.5          9           1
 Y tyrosine            2.5         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C eta 1 isoform b 
PLCH1                 0.996   phospholipase C eta 1 isoform a 
PLCH1                 0.577   phospholipase C eta 1 isoform c 
PLCH2                 0.359   phospholipase C, eta 2 
PLCL2                 0.095   phospholipase C-like 2 isoform 1 
PLCL2                 0.095   phospholipase C-like 2 isoform 2 
PLCD4                 0.094   phospholipase C, delta 4 
PLCL1                 0.094   phospholipase C-like 1 isoform a 
PLCL1                 0.094   phospholipase C-like 1 isoform b 
PLCB4                 0.092   phospholipase C beta 4 isoform a 
PLCB4                 0.092   phospholipase C beta 4 isoform b 
PLCE1                 0.085   phospholipase C, epsilon 1 
PLCD3                 0.082   phospholipase C delta 3 
PLCD1                 0.081   phospholipase C, delta 1 isoform 2 
PLCD1                 0.081   phospholipase C, delta 1 isoform 1 
PLCB3                 0.079   phospholipase C beta 3 
PLCZ1                 0.066   phospholipase C, zeta 1 
PLCG1                 0.064   phospholipase C, gamma 1 isoform a 
PLCG1                 0.064   phospholipase C, gamma 1 isoform b 
PLCG2                 0.063   phospholipase C, gamma 2 
PLCB1                 0.045   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.045   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB2                 0.044   phospholipase C, beta 2 
PLS3                  0.006   plastin 3 
PLS3                  0.006   plastin 3 
CABP5                 0.006   calcium binding protein 5 
CALML5                0.006   calmodulin-like 5 
CALML3                0.006   calmodulin-like 3 
CALM3                 0.005   calmodulin 3 
CALM2                 0.005   calmodulin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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