Guide to the Human Genome
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Name: PLCL2 Sequence: fasta or formatted (1127aa) NCBI GI: 221219000
Description:

phospholipase C-like 2 isoform 1

Referenced in:

Inositol Pathways
Lipid Metabolism

Other entries for this name:
alt prot [1001aa] phospholipase C-like 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         62           2
 C cysteine            2.3         26           1
 D aspartate           5.2         59           3
 E glutamate           7.5         84           2
 F phenylalanine       4.1         46           2
 G glycine             7.4         83           6
 H histidine           2.3         26           1
 I isoleucine          5.9         67           2
 K lysine              7.7         87           2
 L leucine             8.1         91           2
 M methionine          2.8         32           2
 N asparagine          4.9         55           2
 P proline             4.8         54           2
 Q glutamine           4.1         46           2
 R arginine            4.3         49           2
 S serine              8.1         91           2
 T threonine           4.3         48           2
 V valine              6.9         78           2
 W tryptophan          0.9         10           1
 Y tyrosine            2.9         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C-like 2 isoform 1 
PLCL2                 0.888   phospholipase C-like 2 isoform 2 
PLCL1                 0.614   phospholipase C-like 1 isoform a 
PLCL1                 0.598   phospholipase C-like 1 isoform b 
PLCD4                 0.215   phospholipase C, delta 4 
PLCD1                 0.204   phospholipase C, delta 1 isoform 2 
PLCD1                 0.204   phospholipase C, delta 1 isoform 1 
PLCD3                 0.189   phospholipase C delta 3 
PLCZ1                 0.185   phospholipase C, zeta 1 
PLCH2                 0.157   phospholipase C, eta 2 
PLCH1                 0.142   phospholipase C eta 1 isoform c 
PLCH1                 0.142   phospholipase C eta 1 isoform a 
PLCH1                 0.140   phospholipase C eta 1 isoform b 
PLCB4                 0.138   phospholipase C beta 4 isoform a 
PLCB4                 0.138   phospholipase C beta 4 isoform b 
PLCB1                 0.134   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.134   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB2                 0.124   phospholipase C, beta 2 
PLCG1                 0.086   phospholipase C, gamma 1 isoform a 
PLCG1                 0.086   phospholipase C, gamma 1 isoform b 
PLCG2                 0.083   phospholipase C, gamma 2 
PLCB3                 0.069   phospholipase C beta 3 
PLCE1                 0.064   phospholipase C, epsilon 1 
LOC729956             0.010   hypothetical protein LOC729956 
PLA2G4A               0.008   cytosolic phospholipase A2, group IVA 
CC2D1B                0.008   coiled-coil and C2 domain containing 1B 
KRT9                  0.007   keratin 9 
NEDD4L                0.007   neural precursor cell expressed, developmentally dow...
NEDD4L                0.007   neural precursor cell expressed, developmentally do...
NEDD4L                0.007   neural precursor cell expressed, developmentally do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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