Guide to the Human Genome
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Name: UTY Sequence: fasta or formatted (1240aa) NCBI GI: 33188427
Description:

tetratricopeptide repeat protein isoform 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Tetratricopeptide Domains
Y-linked Genes

Other entries for this name:
alt prot [1079aa] tetratricopeptide repeat protein isoform 1
alt prot [1347aa] tetratricopeptide repeat protein isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         89           3
 C cysteine            2.6         32           1
 D aspartate           4.1         51           1
 E glutamate           5.0         62           3
 F phenylalanine       2.8         35           2
 G glycine             6.0         75           2
 H histidine           3.9         48           2
 I isoleucine          3.6         45           1
 K lysine              6.0         75           2
 L leucine             9.8        122           3
 M methionine          1.5         19           1
 N asparagine          6.5         81           3
 P proline             5.3         66           3
 Q glutamine           5.6         70           3
 R arginine            3.6         45           3
 S serine             10.2        127           2
 T threonine           5.8         72           2
 V valine              5.5         68           2
 W tryptophan          1.7         21           2
 Y tyrosine            3.0         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat protein isoform 2 
UTY                   1.000   tetratricopeptide repeat protein isoform 3 
KDM6A                 0.848   ubiquitously transcribed tetratricopeptide repeat, ...
UTY                   0.793   tetratricopeptide repeat protein isoform 1 
KDM6B                 0.219   lysine (K)-specific demethylase 6B 
OGT                   0.012   O-linked GlcNAc transferase isoform 2 
OGT                   0.012   O-linked GlcNAc transferase isoform 1 
CDC23                 0.012   cell division cycle protein 23 
MUC21                 0.011   mucin 21 
TMTC3                 0.010   transmembrane and tetratricopeptide repeat containi...
CTR9                  0.010   SH2 domain binding protein 1 
MUC12                 0.010   PREDICTED: mucin 12 
MUC12                 0.010   PREDICTED: mucin 12, cell surface associated 
BBS4                  0.010   Bardet-Biedl syndrome 4 
TMTC4                 0.009   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.009   transmembrane and tetratricopeptide repeat containi...
TTC37                 0.009   tetratricopeptide repeat domain 37 
TTC28                 0.009   tetratricopeptide repeat domain 28 
CDC27                 0.008   cell division cycle protein 27 isoform 1 
CDC27                 0.008   cell division cycle protein 27 isoform 2 
MUC12                 0.007   PREDICTED: mucin 12 
LOC100130716          0.006   PREDICTED: similar to mucin 11 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform C 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform B 
MUC6                  0.006   mucin 6, gastric 
FLG                   0.006   filaggrin 
TMTC2                 0.006   transmembrane and tetratricopeptide repeat containin...
MUC12                 0.006   PREDICTED: mucin 12 
TMTC1                 0.006   transmembrane and tetratricopeptide repeat containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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