TMTC1 36442

Name: TMTC1	Sequence: fasta or formatted (774aa)		NCBI GI: 83415184
Description: transmembrane and tetratricopeptide repeat containing 1		Referenced in: Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 68 3 C cysteine 2.1 16 1 D aspartate 3.0 23 1 E glutamate 5.7 44 2 F phenylalanine 4.7 36 2 G glycine 5.3 41 2 H histidine 3.2 25 2 I isoleucine 3.4 26 2 K lysine 5.9 46 2 L leucine 14.6 113 5 M methionine 2.1 16 2 N asparagine 4.4 34 2 P proline 4.7 36 2 Q glutamine 4.8 37 2 R arginine 4.7 36 1 S serine 6.6 51 2 T threonine 4.1 32 2 V valine 6.6 51 2 W tryptophan 1.3 10 1 Y tyrosine 4.3 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane and tetratricopeptide repeat containin... TMTC4 0.184 transmembrane and tetratricopeptide repeat containi... TMTC4 0.184 transmembrane and tetratricopeptide repeat containi... TMTC3 0.124 transmembrane and tetratricopeptide repeat containi... TMTC2 0.089 transmembrane and tetratricopeptide repeat containin... OGT 0.074 O-linked GlcNAc transferase isoform 2 OGT 0.074 O-linked GlcNAc transferase isoform 1 NPHP3 0.027 nephrocystin 3 IFT88 0.026 intraflagellar transport 88 homolog isoform 1 IFT88 0.026 intraflagellar transport 88 homolog isoform 2 CDC23 0.026 cell division cycle protein 23 ANAPC7 0.025 anaphase-promoting complex subunit 7 isoform a [Hom... CDC27 0.025 cell division cycle protein 27 isoform 1 CDC27 0.025 cell division cycle protein 27 isoform 2 TTC28 0.024 tetratricopeptide repeat domain 28 DNAJC7 0.024 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... BBS4 0.024 Bardet-Biedl syndrome 4 PEX5 0.023 peroxisomal biogenesis factor 5 isoform d PEX5 0.023 peroxisomal biogenesis factor 5 isoform d PEX5 0.023 peroxisomal biogenesis factor 5 isoform c PEX5 0.023 peroxisomal biogenesis factor 5 isoform a PEX5 0.023 peroxisomal biogenesis factor 5 isoform b TTC13 0.023 tetratricopeptide repeat domain 13 isoform a TTC6 0.023 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.023 PREDICTED: tetratricopeptide repeat domain 6 C14orf25 0.023 PREDICTED: chromosome 14 open reading frame 25 [Hom... TTC13 0.022 tetratricopeptide repeat domain 13 isoform b CTR9 0.022 SH2 domain binding protein 1 TTC37 0.021 tetratricopeptide repeat domain 37 TTC21B 0.020 tetratricopeptide repeat domain 21B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.