Guide to the Human Genome
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Name: OGT Sequence: fasta or formatted (1036aa) NCBI GI: 32307150
Description:

O-linked GlcNAc transferase isoform 2

Referenced in:

Protein Glycosylation
Tetratricopeptide Domains

Other entries for this name:
alt prot [1046aa] O-linked GlcNAc transferase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6        110           3
 C cysteine            2.1         22           1
 D aspartate           5.4         56           2
 E glutamate           5.7         59           2
 F phenylalanine       3.2         33           2
 G glycine             5.5         57           2
 H histidine           3.7         38           2
 I isoleucine          6.0         62           2
 K lysine              5.0         52           3
 L leucine            10.4        108           4
 M methionine          2.7         28           1
 N asparagine          6.3         65           2
 P proline             5.0         52           2
 Q glutamine           4.4         46           3
 R arginine            4.5         47           2
 S serine              5.0         52           2
 T threonine           4.0         41           2
 V valine              5.4         56           2
 W tryptophan          1.0         10           1
 Y tyrosine            4.1         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   O-linked GlcNAc transferase isoform 2 
OGT                   0.996   O-linked GlcNAc transferase isoform 1 
TMTC1                 0.055   transmembrane and tetratricopeptide repeat containin...
TMTC2                 0.044   transmembrane and tetratricopeptide repeat containin...
TMTC4                 0.043   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.043   transmembrane and tetratricopeptide repeat containi...
TMTC3                 0.040   transmembrane and tetratricopeptide repeat containi...
TTC28                 0.037   tetratricopeptide repeat domain 28 
TTC6                  0.033   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.033   PREDICTED: tetratricopeptide repeat domain 6 
C14orf25              0.033   PREDICTED: chromosome 14 open reading frame 25 [Hom...
IFT88                 0.026   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.026   intraflagellar transport 88 homolog isoform 2 
STIP1                 0.026   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
CDC27                 0.025   cell division cycle protein 27 isoform 1 
CDC27                 0.025   cell division cycle protein 27 isoform 2 
CTR9                  0.025   SH2 domain binding protein 1 
TTC13                 0.023   tetratricopeptide repeat domain 13 isoform a 
BBS4                  0.022   Bardet-Biedl syndrome 4 
DNAJC7                0.021   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
PEX5L                 0.021   peroxisomal biogenesis factor 5-like 
NPHP3                 0.020   nephrocystin 3 
PEX5                  0.019   peroxisomal biogenesis factor 5 isoform d 
PEX5                  0.019   peroxisomal biogenesis factor 5 isoform d 
PEX5                  0.019   peroxisomal biogenesis factor 5 isoform c 
PEX5                  0.019   peroxisomal biogenesis factor 5 isoform a 
PEX5                  0.019   peroxisomal biogenesis factor 5 isoform b 
TTC8                  0.019   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.019   tetratricopeptide repeat domain 8 isoform C 
TTC8                  0.019   tetratricopeptide repeat domain 8 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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