Guide to the Human Genome
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Name: UTY Sequence: fasta or formatted (1079aa) NCBI GI: 33188429
Description:

tetratricopeptide repeat protein isoform 1

Referenced in:

Gene Families
Histones, Related Proteins, and Modifying Enzymes
Tetratricopeptide Domains
Y-linked Genes

Other entries for this name:
alt prot [1240aa] tetratricopeptide repeat protein isoform 2
alt prot [1347aa] tetratricopeptide repeat protein isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         85           3
 C cysteine            2.9         31           1
 D aspartate           3.9         42           1
 E glutamate           4.5         49           3
 F phenylalanine       2.9         31           2
 G glycine             6.3         68           2
 H histidine           4.3         46           2
 I isoleucine          3.4         37           1
 K lysine              5.4         58           2
 L leucine            10.4        112           3
 M methionine          1.3         14           1
 N asparagine          5.5         59           2
 P proline             5.6         60           4
 Q glutamine           6.2         67           3
 R arginine            3.5         38           1
 S serine             11.4        123           2
 T threonine           6.0         65           2
 V valine              4.6         50           1
 W tryptophan          1.1         12           1
 Y tyrosine            3.0         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat protein isoform 1 
UTY                   0.917   tetratricopeptide repeat protein isoform 3 
UTY                   0.917   tetratricopeptide repeat protein isoform 2 
KDM6A                 0.751   ubiquitously transcribed tetratricopeptide repeat, ...
KDM6B                 0.084   lysine (K)-specific demethylase 6B 
LOC100128260          0.040   PREDICTED: hCG_1742852 
LOC100128260          0.040   PREDICTED: hCG_1742852 
LOC100288773          0.039   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.039   PREDICTED: hCG_1742852 
LOC100128682          0.033   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.033   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.033   PREDICTED: hypothetical protein LOC100128682 
C16orf89              0.029   hypothetical protein LOC146556 isoform 1 
BEND2                 0.015   BEN domain containing 2 
STAP2                 0.015   signal transducing adaptor family member 2 isoform 1...
ZNF195                0.015   zinc finger protein 195 isoform 2 
ZNF195                0.015   zinc finger protein 195 isoform 1 
OGT                   0.014   O-linked GlcNAc transferase isoform 2 
OGT                   0.014   O-linked GlcNAc transferase isoform 1 
MAP3K15               0.014   mitogen-activated protein kinase kinase kinase 15 [...
CDC23                 0.013   cell division cycle protein 23 
ZNF283                0.013   zinc finger protein 283 
CD55                  0.013   decay accelerating factor for complement isoform 2 ...
SEPSECS               0.013   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
MUC21                 0.012   mucin 21 
TMTC3                 0.012   transmembrane and tetratricopeptide repeat containi...
CNGA1                 0.012   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CTR9                  0.012   SH2 domain binding protein 1 
MUC12                 0.011   PREDICTED: mucin 12 
MUC12                 0.011   PREDICTED: mucin 12, cell surface associated 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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