Guide to the Human Genome
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Name: TTC37 Sequence: fasta or formatted (1564aa) NCBI GI: 7662078
Description:

tetratricopeptide repeat domain 37

Referenced in:

Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2        175           3
 C cysteine            2.4         37           2
 D aspartate           4.9         76           2
 E glutamate           6.7        105           2
 F phenylalanine       1.9         29           2
 G glycine             4.9         76           2
 H histidine           2.6         41           1
 I isoleucine          3.8         60           2
 K lysine              8.1        126           3
 L leucine            13.7        214           3
 M methionine          1.9         30           2
 N asparagine          4.2         66           2
 P proline             2.3         36           1
 Q glutamine           5.7         89           2
 R arginine            3.6         56           2
 S serine              6.3         98           3
 T threonine           4.5         71           2
 V valine              5.1         79           2
 W tryptophan          1.5         24           1
 Y tyrosine            4.9         76           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 37 
CTR9                  0.012   SH2 domain binding protein 1 
OGT                   0.012   O-linked GlcNAc transferase isoform 2 
OGT                   0.012   O-linked GlcNAc transferase isoform 1 
TMTC1                 0.010   transmembrane and tetratricopeptide repeat containin...
C14orf25              0.010   PREDICTED: chromosome 14 open reading frame 25 [Hom...
TTC6                  0.010   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.010   PREDICTED: tetratricopeptide repeat domain 6 
IFT88                 0.009   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.009   intraflagellar transport 88 homolog isoform 2 
KDM6A                 0.008   ubiquitously transcribed tetratricopeptide repeat, ...
CDC27                 0.008   cell division cycle protein 27 isoform 1 
CDC27                 0.008   cell division cycle protein 27 isoform 2 
TTC28                 0.007   tetratricopeptide repeat domain 28 
PPP5C                 0.007   protein phosphatase 5, catalytic subunit 
PEX5L                 0.007   peroxisomal biogenesis factor 5-like 
NARG1L                0.007   NMDA receptor regulated 1-like protein isoform 1 [Ho...
UTY                   0.007   tetratricopeptide repeat protein isoform 3 
UTY                   0.007   tetratricopeptide repeat protein isoform 1 
UTY                   0.007   tetratricopeptide repeat protein isoform 2 
NARG1L                0.007   NMDA receptor regulated 1-like protein isoform 3 [H...
NARG1L                0.007   NMDA receptor regulated 1-like protein isoform 2 [Ho...
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform C 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform B 
TMTC3                 0.006   transmembrane and tetratricopeptide repeat containi...
DNAJC7                0.006   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
CDC23                 0.006   cell division cycle protein 23 
STIP1                 0.006   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
PEX5                  0.006   peroxisomal biogenesis factor 5 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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