Search of human proteins with 32698950

Search of human proteins with 32698950

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32698950 hypothetical protein LOC283870 [Homo sapiens]
         (228 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32698950 hypothetical protein LOC283870 [Homo sapiens]             474   e-134
gi|149999608 surfactant protein C [Homo sapiens]                       37   0.014
gi|119392086 Indian hedgehog homolog [Homo sapiens]                    35   0.053
gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens]            32   0.34 
gi|40068065 hypothetical protein LOC54058 [Homo sapiens]               32   0.45 
gi|110349719 titin isoform N2-A [Homo sapiens]                         31   0.77 
gi|110349717 titin isoform novex-2 [Homo sapiens]                      31   0.77 
gi|110349713 titin isoform novex-1 [Homo sapiens]                      31   0.77 
gi|110349715 titin isoform N2-B [Homo sapiens]                         31   0.77 
gi|239754389 PREDICTED: hypothetical protein [Homo sapiens]            31   1.00 
gi|239748973 PREDICTED: hypothetical protein [Homo sapiens]            31   1.00 
gi|239742995 PREDICTED: hypothetical protein XP_002342714 [Homo ...    31   1.00 
gi|223029463 fibrinogen C domain containing 1 [Homo sapiens]           30   1.3  
gi|223029461 fibrinogen C domain containing 1 [Homo sapiens]           30   1.3  
gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor ...    30   1.3  
gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor...    30   1.3  
gi|194328809 latent transforming growth factor beta binding prot...    30   1.7  
gi|18497288 latent transforming growth factor beta binding prote...    30   1.7  
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       30   1.7  
gi|206725456 zinc activated ligand-gated ion channel [Homo sapiens]    30   1.7  
gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]            29   2.9  
gi|239049391 membrane metallo-endopeptidase-like 1 [Homo sapiens]      29   2.9  
gi|4885197 ephrin A4 isoform a [Homo sapiens]                          29   2.9  
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]    29   2.9  
gi|169163053 PREDICTED: hypothetical protein, partial [Homo sapi...    29   3.8  
gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo...    29   3.8  
gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo...    29   3.8  
gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]    28   5.0  
gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),...    28   5.0  
gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]          28   5.0  

>gi|32698950 hypothetical protein LOC283870 [Homo sapiens]
          Length = 228

 Score =  474 bits (1220), Expect = e-134
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MEPASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGPPK 60
           MEPASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGPPK
Sbjct: 1   MEPASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGPPK 60

Query: 61  PRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCICYRPE 120
           PRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCICYRPE
Sbjct: 61  PRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCICYRPE 120

Query: 121 EHQVCFLRLMEDSDRETLRLLVDTSKVQEAWVPSQDTHHTQELLAVQGSLEVDPAQAGAL 180
           EHQVCFLRLMEDSDRETLRLLVDTSKVQEAWVPSQDTHHTQELLAVQGSLEVDPAQAGAL
Sbjct: 121 EHQVCFLRLMEDSDRETLRLLVDTSKVQEAWVPSQDTHHTQELLAVQGSLEVDPAQAGAL 180

Query: 181 VQRLCMRTPIYWARRAEGPRRQRLIYLCIDICFPSNICVSVCFYYLPD 228
           VQRLCMRTPIYWARRAEGPRRQRLIYLCIDICFPSNICVSVCFYYLPD
Sbjct: 181 VQRLCMRTPIYWARRAEGPRRQRLIYLCIDICFPSNICVSVCFYYLPD 228


>gi|149999608 surfactant protein C [Homo sapiens]
          Length = 197

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 15/168 (8%)

Query: 33  LLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAAT 92
           LL+++++V+  V ++ G LL       K     L M++ +P   +        +A +   
Sbjct: 36  LLIVVVVVVLIVVVIVGALLMGLHMSQKHTEMVLEMSIGAPEAQQR-------LALSEHL 88

Query: 93  ITVTPPQSNHSWAVLFDGQSGCICYRPEEHQVCFLRLMEDSDRETLRLL--------VDT 144
           +T        +  V++D Q   I Y+P     C++  +      +L  L        ++ 
Sbjct: 89  VTTATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYIMKIAPESIPSLEALTRKVHNFQMEC 148

Query: 145 SKVQEAWVPSQDTHHTQELLAVQGSLEVDPAQAGALVQRLCMRTPIYW 192
           S   +  VP+      +   A       DPA  G  V  LC   P+Y+
Sbjct: 149 SLQAKPAVPTSKLGQAEGRDAGSAPSGGDPAFLGMAVSTLCGEVPLYY 196


>gi|119392086 Indian hedgehog homolog [Homo sapiens]
          Length = 411

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 32  LLLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAA 91
           L+LLLLL+V AA G   G ++GS + PP+ +L  L     SP++P   +  L    R   
Sbjct: 14  LVLLLLLVVPAAWGCGPGRVVGSRRRPPR-KLVPLAYKQFSPNVP---EKTLGASGRYEG 69

Query: 92  TITVTPPQSNHSWAVLFDGQSGCICYRPEEHQVCFLRLMEDSDRETLRLLVDT------- 144
            I     +S+  +  L    +  I ++ EE+     RLM    ++ L  L  +       
Sbjct: 70  KIA----RSSERFKELTPNYNPDIIFKDEENTGAD-RLMTQRCKDRLNSLAISVMNQWPG 124

Query: 145 --SKVQEAWVPSQDTHHTQELLAVQG 168
              +V E W   +D HH++E L  +G
Sbjct: 125 VKLRVTEGW--DEDGHHSEESLHYEG 148


>gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens]
          Length = 184

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 16/161 (9%)

Query: 33  LLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAAT 92
           +L+  L+VL   GI + G             +   +  PS +     +T+ +D  +N A 
Sbjct: 3   ILVAFLVVLTIFGIQSHGY------------EVFNIISPSNNGGNVQETVTIDNEKNTAI 50

Query: 93  ITVTPPQSNHSWAVLFDGQSGCICYRPEEHQVCFLRLMEDSDRETLRLLVDTSKVQEAWV 152
           I +     + S   +FD + G I  R    + CF+  M+  +   L  L      ++A  
Sbjct: 51  INIHA--GSCSSTTIFDYKHGYIASRVLSRRACFILKMDHQNIPPLNNLQWYIYEKQALD 108

Query: 153 PSQDTHHTQELLAVQGSL--EVDPAQAGALVQRLCMRTPIY 191
               + +T        SL  +VD    G+ +++LC   P+Y
Sbjct: 109 NMFSSKYTWVKYNPLESLIKDVDWFLLGSPIEKLCKHIPLY 149


>gi|40068065 hypothetical protein LOC54058 [Homo sapiens]
          Length = 322

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 21/50 (42%), Positives = 23/50 (46%)

Query: 50  GLLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQ 99
           G LGSA  P  P    L    PSP  P P + IL  V +  ATI    PQ
Sbjct: 168 GALGSALPPELPPTGILPTASPSPLAPDPPRIILPTVPQPPATIIQQLPQ 217


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 57    GPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCIC 116
             GPP     T+     SP  P P + ++ D+  NAAT++ T P+S        DG S    
Sbjct: 17687 GPPLDSTPTVAKHKFSPPSP-PGKPVVTDITENAATVSWTLPKS--------DGGSPITG 17737

Query: 117   YRPEEHQV 124
             Y  E  +V
Sbjct: 17738 YYMERREV 17745



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 51    LLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSN 101
             L  +  G   P   T  + +  P +P P +  LVDV RN ATI    P+S+
Sbjct: 25273 LASNEYGIGLPAETTEPVKVSEPPLP-PGRVTLVDVTRNTATIKWEKPESD 25322


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 57    GPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCIC 116
             GPP     T+     SP  P P + ++ D+  NAAT++ T P+S        DG S    
Sbjct: 11382 GPPLDSTPTVAKHKFSPPSP-PGKPVVTDITENAATVSWTLPKS--------DGGSPITG 11432

Query: 117   YRPEEHQV 124
             Y  E  +V
Sbjct: 11433 YYMERREV 11440



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 51    LLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSN 101
             L  +  G   P   T  + +  P +P P +  LVDV RN ATI    P+S+
Sbjct: 18968 LASNEYGIGLPAETTEPVKVSEPPLP-PGRVTLVDVTRNTATIKWEKPESD 19017


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 57    GPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCIC 116
             GPP     T+     SP  P P + ++ D+  NAAT++ T P+S        DG S    
Sbjct: 11315 GPPLDSTPTVAKHKFSPPSP-PGKPVVTDITENAATVSWTLPKS--------DGGSPITG 11365

Query: 117   YRPEEHQV 124
             Y  E  +V
Sbjct: 11366 YYMERREV 11373



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 51    LLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSN 101
             L  +  G   P   T  + +  P +P P +  LVDV RN ATI    P+S+
Sbjct: 18901 LASNEYGIGLPAETTEPVKVSEPPLP-PGRVTLVDVTRNTATIKWEKPESD 18950


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 57    GPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSNHSWAVLFDGQSGCIC 116
             GPP     T+     SP  P P + ++ D+  NAAT++ T P+S        DG S    
Sbjct: 11190 GPPLDSTPTVAKHKFSPPSP-PGKPVVTDITENAATVSWTLPKS--------DGGSPITG 11240

Query: 117   YRPEEHQV 124
             Y  E  +V
Sbjct: 11241 YYMERREV 11248



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 51    LLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAATITVTPPQSN 101
             L  +  G   P   T  + +  P +P P +  LVDV RN ATI    P+S+
Sbjct: 18776 LASNEYGIGLPAETTEPVKVSEPPLP-PGRVTLVDVTRNTATIKWEKPESD 18825


>gi|239754389 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 161

 Score = 30.8 bits (68), Expect = 1.00
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 55  AQGPPKPRLQTLRMTLPSPHMPRPN---QTILVDVAR-NAATITVTPPQSNHSWAVLFDG 110
           A GP + RLQ L   + +PH+  P+   Q IL  V   N    T+    + H    LF  
Sbjct: 39  AVGPDQARLQLLSHPVDAPHIAGPHGSRQPILNVVGSFNHLLFTIKGDDTRHWTKYLFRH 98

Query: 111 QSGCI---CYRPEEHQVCFL 127
            +G I   CY   +H+V  L
Sbjct: 99  AAGFILNVCYHRGKHKVACL 118


>gi|239748973 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 161

 Score = 30.8 bits (68), Expect = 1.00
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 55  AQGPPKPRLQTLRMTLPSPHMPRPN---QTILVDVAR-NAATITVTPPQSNHSWAVLFDG 110
           A GP + RLQ L   + +PH+  P+   Q IL  V   N    T+    + H    LF  
Sbjct: 39  AVGPDQARLQLLSHPVDAPHIAGPHGSRQPILNVVGSFNHLLFTIKGDDTRHWTKYLFRH 98

Query: 111 QSGCI---CYRPEEHQVCFL 127
            +G I   CY   +H+V  L
Sbjct: 99  AAGFILNVCYHRGKHKVACL 118


>gi|239742995 PREDICTED: hypothetical protein XP_002342714 [Homo
           sapiens]
          Length = 161

 Score = 30.8 bits (68), Expect = 1.00
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 55  AQGPPKPRLQTLRMTLPSPHMPRPN---QTILVDVAR-NAATITVTPPQSNHSWAVLFDG 110
           A GP + RLQ L   + +PH+  P+   Q IL  V   N    T+    + H    LF  
Sbjct: 39  AVGPDQARLQLLSHPVDAPHIAGPHGSRQPILNVVGSFNHLLFTIKGDDTRHWTKYLFRH 98

Query: 111 QSGCI---CYRPEEHQVCFL 127
            +G I   CY   +H+V  L
Sbjct: 99  AAGFILNVCYHRGKHKVACL 118


>gi|223029463 fibrinogen C domain containing 1 [Homo sapiens]
          Length = 461

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 58/202 (28%), Positives = 83/202 (41%), Gaps = 42/202 (20%)

Query: 1   MEPASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGP-- 58
           M  A+   +RP+  P     +PSCG      LL L +LL +A  G V    L  A  P  
Sbjct: 9   MGGAAQLEDRPRDKPQ----RPSCGYVLCTVLLALAVLLAVAVTGAVL--FLNHAHAPGT 62

Query: 59  -PKPRLQTLRMTLPSPHMPRPNQTILVDVAR---NAATITVTP--PQSNHSWAVLFDGQS 112
            P P + T   +  S          LV V R   +  +I + P  P    S+A L   Q+
Sbjct: 63  APPPVVSTGAASANS---------ALVTVERADSSHLSILIDPRCPDLTDSFARLESAQA 113

Query: 113 GCICYRPEEHQVCFLRLMEDSDRETL--------RLLVDTSKVQEAWVPSQDTHHT--QE 162
             +     EHQ    RL+ D ++E L        RLL   S++Q   +  +  H T  Q 
Sbjct: 114 S-VLQALTEHQ-AQPRLVGDQEQELLDTLADQLPRLLARASELQTECMGLRKGHGTLGQG 171

Query: 163 LLAVQGSLEVDPAQAGALVQRL 184
           L A+Q       ++ G L+Q L
Sbjct: 172 LSALQ-------SEQGRLIQLL 186


>gi|223029461 fibrinogen C domain containing 1 [Homo sapiens]
          Length = 461

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 58/202 (28%), Positives = 83/202 (41%), Gaps = 42/202 (20%)

Query: 1   MEPASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGP-- 58
           M  A+   +RP+  P     +PSCG      LL L +LL +A  G V    L  A  P  
Sbjct: 9   MGGAAQLEDRPRDKPQ----RPSCGYVLCTVLLALAVLLAVAVTGAVL--FLNHAHAPGT 62

Query: 59  -PKPRLQTLRMTLPSPHMPRPNQTILVDVAR---NAATITVTP--PQSNHSWAVLFDGQS 112
            P P + T   +  S          LV V R   +  +I + P  P    S+A L   Q+
Sbjct: 63  APPPVVSTGAASANS---------ALVTVERADSSHLSILIDPRCPDLTDSFARLESAQA 113

Query: 113 GCICYRPEEHQVCFLRLMEDSDRETL--------RLLVDTSKVQEAWVPSQDTHHT--QE 162
             +     EHQ    RL+ D ++E L        RLL   S++Q   +  +  H T  Q 
Sbjct: 114 S-VLQALTEHQ-AQPRLVGDQEQELLDTLADQLPRLLARASELQTECMGLRKGHGTLGQG 171

Query: 163 LLAVQGSLEVDPAQAGALVQRL 184
           L A+Q       ++ G L+Q L
Sbjct: 172 LSALQ-------SEQGRLIQLL 186


>gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor
          [Homo sapiens]
          Length = 650

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 13 PGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTL--RMTL 70
          P   G+  +P       +  LLLLLL    A+G +AGG  G+A+ P   ++  L  R+TL
Sbjct: 6  PAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLCGRLTL 65


>gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor
          [Homo sapiens]
          Length = 651

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 13 PGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTL--RMTL 70
          P   G+  +P       +  LLLLLL    A+G +AGG  G+A+ P   ++  L  R+TL
Sbjct: 6  PAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSAQVAGLCGRLTL 65


>gi|194328809 latent transforming growth factor beta binding
          protein 3 isoform 1 [Homo sapiens]
          Length = 1303

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 13 PGPTGVK--TKPSCGGWRAVGLLLLLLLLVLAAVGI---VAGGLLG 53
          PGP G      P   G  A GLL LLLLL+L  +G+   V GG  G
Sbjct: 2  PGPRGAAGGLAPEMRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAG 47


>gi|18497288 latent transforming growth factor beta binding
          protein 3 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 13 PGPTGVK--TKPSCGGWRAVGLLLLLLLLVLAAVGI---VAGGLLG 53
          PGP G      P   G  A GLL LLLLL+L  +G+   V GG  G
Sbjct: 2  PGPRGAAGGLAPEMRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAG 47


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 46  IVAGGLLGSAQGPPKPRLQTLRMTL------PSPHMPRPNQTILVDVARNAATITVTPP 98
           + +GG L   Q PP  RL   R  L       S H+PRP Q  L + A       ++ P
Sbjct: 314 LTSGGSLPLLQSPPSTRLSPARHPLVPNQGDHSAHLPRPQQHFLPNQAHQGDHYRLSQP 372


>gi|206725456 zinc activated ligand-gated ion channel [Homo sapiens]
          Length = 412

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 32  LLLLLLLLVLAAV---GIVAGGLLGSAQGP-PKPRLQTLRMTLPSPH 74
           LLLLL L  +  V   G++A G LG+  GP P PR +      P PH
Sbjct: 300 LLLLLFLSTIETVLLAGLLARGNLGAKSGPSPAPRGEQREHGNPGPH 346


>gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 959

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 31  GLLLLLLLLVLAAVGIVAGGLLGSA-QGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARN 89
           GLLL+L   +   V   AG   G+  +GP +P +Q        P  P P    L  VA +
Sbjct: 202 GLLLVLHAPLSNVVPTWAGATAGTQREGPSQPGIQ--------PPAPLPQHRDLPTVAPS 253

Query: 90  AATITVTPPQSNHSWA 105
           +  + +TPP     W+
Sbjct: 254 SQALFLTPPHHVCLWS 269


>gi|239049391 membrane metallo-endopeptidase-like 1 [Homo sapiens]
          Length = 779

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 14 GPTGVKTKPSCGGWRAVGLL---LLLLLLVLAAVGIVAGGLLGSAQGPPKPRL 63
          GP G+       G +  G L   LLLLLL++ A  +  G L    +G   PRL
Sbjct: 6  GPVGMVESAGRAGQKRPGFLEGGLLLLLLLVTAALVALGVLYADRRGKQLPRL 58


>gi|4885197 ephrin A4 isoform a [Homo sapiens]
          Length = 201

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 8/55 (14%)

Query: 1   MEPASCCAERPKPG--PTGVKTKPSCGGWRA------VGLLLLLLLLVLAAVGIV 47
           ++ + CC ER      P G   +    GWR       + LLLLLLLL+L  + I+
Sbjct: 147 LQVSVCCKERKSESAHPVGSPGESGTSGWRGGDTPSPLCLLLLLLLLILRLLRIL 201


>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
          Length = 4861

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 32  LLLLLLLLVLAAVGIVAGGLLGSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNAA 91
           L LL   L LA  G VA  +LG   GP    L+ L   L    +P   Q ++++     A
Sbjct: 795 LKLLSNHLALALAGGVATSILGRQAGP----LRNLLFRLMDSTVPDEIQEVVIETLSVGA 850

Query: 92  TITVTP------------PQSNHSWAVLFDGQ 111
           T+ + P            PQ    W  L  GQ
Sbjct: 851 TMLLPPLRERMELLHSLLPQGPDRWESLSKGQ 882


>gi|169163053 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 300

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 205 IYLCIDICFPSNICVSVCFY 224
           +Y+CI +C  ++IC+ +C Y
Sbjct: 59  MYICIYMCIYTHICIHICIY 78


>gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo
          sapiens]
          Length = 606

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 3  PASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVA 48
          P   C ++ +PGP   + + +     +V +L L L L+L AV ++A
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73


>gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo
          sapiens]
          Length = 466

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 3  PASCCAERPKPGPTGVKTKPSCGGWRAVGLLLLLLLLVLAAVGIVA 48
          P   C ++ +PGP   + + +     +V +L L L L+L AV ++A
Sbjct: 28 PTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLA 73


>gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]
          Length = 491

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 11/70 (15%)

Query: 20  TKPSC-------GGWRAVGL-LLLLLLLVLAAVGIVAGGLLGSA--QGPPKPR-LQTLRM 68
           +KP+C         W  + L  LL+LLLV+AA G++   L+G+   Q    PR L+  R 
Sbjct: 213 SKPTCFLLEVPEANWAFLVLPSLLILLLVIAAGGVIWKTLMGNPWFQRAKMPRALELTRG 272

Query: 69  TLPSPHMPRP 78
             P+P +  P
Sbjct: 273 VRPTPRVRAP 282


>gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),
          member 2 [Homo sapiens]
          Length = 812

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)

Query: 25 GGWRAVG-----LLLLLLLLVLAAVGIVAGGLL------GSAQGPPKP 61
          G WR++      +LLLLLL V   VG +A  LL      G++  PP P
Sbjct: 5  GNWRSLRAPLPPMLLLLLLQVAGPVGALAETLLNAPRAMGTSSSPPSP 52


>gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
          Length = 386

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 45 GIVAGGLL---GSAQGPPKPRLQTLRMTLPSPHMPRPNQTILVDVARNA 90
          G   GGLL   G+  G P+  L       P P  PR    +++D+ R A
Sbjct: 24 GRALGGLLRWVGARMGEPRESLAPAAPADPGPASPRGGTAVILDIFRRA 72


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,729,425
Number of Sequences: 37866
Number of extensions: 524927
Number of successful extensions: 1883
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 64
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.