SFTPC 4959

Name: SFTPC	Sequence: fasta or formatted (197aa)		NCBI GI: 149999608
Description: surfactant protein C		Referenced in: Lung
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 18 2 C cysteine 3.0 6 2 D aspartate 2.5 5 1 E glutamate 5.6 11 1 F phenylalanine 2.0 4 1 G glycine 8.1 16 2 H histidine 2.5 5 1 I isoleucine 5.6 11 1 K lysine 4.1 8 1 L leucine 11.2 22 2 M methionine 4.6 9 1 N asparagine 0.5 1 1 P proline 7.6 15 2 Q glutamine 4.1 8 2 R arginine 3.0 6 1 S serine 7.6 15 1 T threonine 4.6 9 2 V valine 10.7 21 6 W tryptophan 0.0 0 0 Y tyrosine 3.6 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 surfactant protein C LECT1 0.046 leukocyte cell derived chemotaxin 1 isoform 2 precur... LECT1 0.046 leukocyte cell derived chemotaxin 1 isoform 1 precurs... C16orf79 0.033 hypothetical protein LOC283870 GKN2 0.025 trefoil factor interactions(z) 1 LOC388849 0.008 PREDICTED: similar to hCG1732289 HECTD2 0.008 HECT domain containing 2 isoform a RPUSD1 0.008 RNA pseudouridylate synthase domain containing 1 [Ho... C8orf34 0.008 hypothetical protein LOC116328 LOC100292064 0.005 PREDICTED: hypothetical protein XP_002345331 LOC100290378 0.005 PREDICTED: hypothetical protein XP_002347782 LOC100287901 0.005 PREDICTED: hypothetical protein XP_002342210 FAM128A 0.005 hypothetical protein LOC653784 SLITRK4 0.005 slit and trk like 4 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.