Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC9A2 Sequence: fasta or formatted (812aa) NCBI GI: 15529998
Description:

solute carrier family 9 (sodium/hydrogen exchanger), member 2

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         49           2
 C cysteine            1.2         10           1
 D aspartate           3.4         28           2
 E glutamate           5.7         46           2
 F phenylalanine       6.7         54           2
 G glycine             5.7         46           2
 H histidine           1.8         15           1
 I isoleucine          7.5         61           2
 K lysine              5.4         44           2
 L leucine            11.6         94           6
 M methionine          2.3         19           1
 N asparagine          3.3         27           1
 P proline             5.7         46           3
 Q glutamine           2.8         23           2
 R arginine            5.7         46           3
 S serine              8.0         65           3
 T threonine           6.4         52           2
 V valine              6.8         55           2
 W tryptophan          1.4         11           1
 Y tyrosine            2.6         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9 (sodium/hydrogen exchanger),... 
SLC9A4                0.508   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A1                0.401   solute carrier family 9, isoform A1 
SLC9A3                0.324   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A5                0.315   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A8                0.123   sodium/hydrogen exchanger 8 
SLC9A6                0.110   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A9                0.110   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A6                0.105   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A7                0.098   solute carrier family 9, member 7 
SLC9A10               0.024   sperm-specific sodium proton exchanger 
SLC9A11               0.018   solute carrier family 9, member 11 
AMBRA1                0.009   activating molecule in beclin-1-regulated autophagy ...
FMN2                  0.006   formin 2 
AFF1                  0.006   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
SFRS4                 0.006   splicing factor, arginine/serine-rich 4 
LIG1                  0.006   DNA ligase I 
NUAK2                 0.006   NUAK family, SNF1-like kinase, 2 
NAV2                  0.006   neuron navigator 2 isoform 4 
NAV2                  0.006   neuron navigator 2 isoform 3 
NAV2                  0.006   neuron navigator 2 isoform 2 
LUC7L2                0.006   LUC7-like 2 
ABL1                  0.005   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.005   c-abl oncogene 1, receptor tyrosine kinase isoform b...
GPR158                0.005   G protein-coupled receptor 158 
CIC                   0.005   capicua homolog 
ACIN1                 0.005   apoptotic chromatin condensation inducer 1 
ENAH                  0.005   enabled homolog isoform a 
ENAH                  0.005   enabled homolog isoform b 
LOC441294             0.005   hypothetical protein LOC441294 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press