Guide to the Human Genome
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Name: IL28RA Sequence: fasta or formatted (491aa) NCBI GI: 28416909
Description:

interleukin 28 receptor, alpha isoform 2

Referenced in:

Interferon
Interleukins and Their Receptors

Other entries for this name:
alt prot [520aa] interleukin 28 receptor, alpha isoform 1
alt prot [244aa] interleukin 28 receptor, alpha isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         35           2
 C cysteine            1.6          8           1
 D aspartate           4.1         20           1
 E glutamate           9.6         47           5
 F phenylalanine       3.3         16           1
 G glycine             7.5         37           2
 H histidine           1.4          7           2
 I isoleucine          1.6          8           1
 K lysine              3.7         18           2
 L leucine            10.4         51           3
 M methionine          1.4          7           2
 N asparagine          2.0         10           1
 P proline            10.4         51           3
 Q glutamine           4.3         21           2
 R arginine            5.3         26           3
 S serine              9.0         44           2
 T threonine           5.9         29           1
 V valine              5.5         27           1
 W tryptophan          3.3         16           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 28 receptor, alpha isoform 2 
IL28RA                0.984   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.445   interleukin 28 receptor, alpha isoform 3 
IL22RA2               0.038   interleukin 22-binding protein isoform 2 
IL22RA2               0.030   interleukin 22-binding protein isoform 3 
IL20RA                0.030   interleukin 20 receptor, alpha 
IL22RA2               0.027   interleukin 22-binding protein isoform 1 
IL20RB                0.020   interleukin 20 receptor beta precursor 
TNRC6C                0.019   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.019   trinucleotide repeat containing 6C isoform 2 
IL10RB                0.014   interleukin 10 receptor, beta precursor 
IFNAR1                0.013   interferon-alpha receptor 1 precursor 
GDF1                  0.012   growth differentiation factor 1 
HDGFL1                0.012   hepatoma derived growth factor-like 1 
SETD1A                0.012   SET domain containing 1A 
PPP1R15A              0.012   protein phosphatase 1, regulatory subunit 15A [Homo...
PELP1                 0.011   proline, glutamic acid and leucine rich protein 1 [...
AEBP2                 0.011   AE binding protein 2 isoform b 
AEBP2                 0.011   AE binding protein 2 isoform a 
SETD1B                0.010   SET domain containing 1B 
SLC4A3                0.010   solute carrier family 4, anion exchanger, member 3 ...
TTBK1                 0.010   tau tubulin kinase 1 
NES                   0.009   nestin 
PRUNE2                0.009   prune homolog 2 
TNRC6A                0.009   trinucleotide repeat containing 6A 
HNRNPU                0.009   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.009   heterogeneous nuclear ribonucleoprotein U isoform a ...
PRG2                  0.009   plasticity-related protein 2 
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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