Search of human proteins with 32698861

Search of human proteins with 32698861

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32698861 cerebellin 2 precursor [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32698861 cerebellin 2 precursor [Homo sapiens]                     448   e-126
gi|4757922 cerebellin 1 precursor [Homo sapiens]                      298   3e-81
gi|18104944 cerebellin 4 precursor [Homo sapiens]                     281   2e-76
gi|89886217 cerebellin 3 precursor [Homo sapiens]                     202   2e-52
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]           94   9e-20
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]           94   9e-20
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]           94   9e-20
gi|154937344 complement component 1, q subcomponent-like 2 [Homo...    89   4e-18
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ...    87   2e-17
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ...    82   3e-16
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s...    80   2e-15
gi|13569919 C1q and tumor necrosis factor related protein 3 isof...    78   5e-15
gi|62739183 C1q and tumor necrosis factor related protein 3 isof...    78   5e-15
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho...    64   8e-11
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom...    63   2e-10
gi|14149712 C1q and tumor necrosis factor related protein 5 prec...    61   9e-10
gi|87298828 complement component 1, q subcomponent, B chain prec...    59   4e-09
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho...    57   1e-08
gi|13994280 C1q and tumor necrosis factor related protein 7 isof...    56   3e-08
gi|206597454 C1q and tumor necrosis factor related protein 7 iso...    56   3e-08
gi|206597452 C1q and tumor necrosis factor related protein 7 iso...    56   3e-08
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]           55   5e-08
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom...    55   5e-08
gi|38372917 C1q and tumor necrosis factor related protein 1 isof...    53   2e-07
gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom...    53   2e-07
gi|13569944 C1q and tumor necrosis factor related protein 1 isof...    53   2e-07
gi|56786155 complement component 1, q subcomponent, C chain prec...    52   3e-07
gi|166235903 complement component 1, q subcomponent, C chain pre...    52   3e-07
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                52   4e-07
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]        50   1e-06

>gi|32698861 cerebellin 2 precursor [Homo sapiens]
          Length = 224

 Score =  448 bits (1152), Expect = e-126
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MQAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVL 60
           MQAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVL
Sbjct: 1   MQAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVL 60

Query: 61  EGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQV 120
           EGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQV
Sbjct: 61  EGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQV 120

Query: 121 LVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVT 180
           LVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVT
Sbjct: 121 LVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVT 180

Query: 181 REAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL 224
           REAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
Sbjct: 181 REAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL 224


>gi|4757922 cerebellin 1 precursor [Homo sapiens]
          Length = 193

 Score =  298 bits (762), Expect = 3e-81
 Identities = 154/193 (79%), Positives = 167/193 (86%), Gaps = 1/193 (0%)

Query: 32  LGVALALLLLLLPACCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSA 91
           LGV   LLL       P R QN+TEPIVLEGKCLVVCDS+P++D   T+ LGISVRSGSA
Sbjct: 2   LGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTA-LGISVRSGSA 60

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           KVAFSA RSTNHEPSEMSNRTM IYFDQVLVNIGN+FD   S F+APRKGIYSF+FHVVK
Sbjct: 61  KVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVK 120

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGW 211
           VYNRQTIQVSLM NG+PVISAFAGDQDVTREAASNGVL+ ME+ D+ +LKLERGNLMGGW
Sbjct: 121 VYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGGW 180

Query: 212 KYSTFSGFLVFPL 224
           KYSTFSGFLVFPL
Sbjct: 181 KYSTFSGFLVFPL 193


>gi|18104944 cerebellin 4 precursor [Homo sapiens]
          Length = 201

 Score =  281 bits (720), Expect = 2e-76
 Identities = 144/193 (74%), Positives = 167/193 (86%), Gaps = 4/193 (2%)

Query: 34  VALALLLLLLPACCPVRAQNDTEPIVLEGKCLVVCDSSPSAD--GAVTSSLGISVRSGSA 91
           V   LL+L LP   PV AQNDTEPIVLEGKCLVVCDS+P+ D  G+ +S LGISVR+ ++
Sbjct: 11  VPAVLLVLTLPGL-PVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPLGISVRAANS 69

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           KVAFSA RSTNHEPSEMSN+T  IYFDQ+LVN+GN F L  S+FVAPRKGIYSFSFHV+K
Sbjct: 70  KVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTL-ESVFVAPRKGIYSFSFHVIK 128

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGW 211
           VY  QTIQV+LM NG PVISAFAGD+DVTREAA+NGVLL +++EDKV+LKLE+GNL+GGW
Sbjct: 129 VYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKLEKGNLVGGW 188

Query: 212 KYSTFSGFLVFPL 224
           +YSTFSGFLVFPL
Sbjct: 189 QYSTFSGFLVFPL 201


>gi|89886217 cerebellin 3 precursor [Homo sapiens]
          Length = 205

 Score =  202 bits (514), Expect = 2e-52
 Identities = 114/195 (58%), Positives = 142/195 (72%), Gaps = 9/195 (4%)

Query: 33  GVALALLLLLLPACCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVT-SSLGISVRSGSA 91
           G+ L L+LL L A     AQ  +EP++LEG+CLVVC+   +A G    ++LG    +   
Sbjct: 17  GLPLVLVLLALGAGW---AQEGSEPVLLEGECLVVCEPGRAAAGGPGGAALG---EAPPG 70

Query: 92  KVAFSATRSTNHEPS-EMSNRTM-TIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHV 149
           +VAF+A RS +HEP+ E  N T   IYFDQVLVN G  FD AS  FVAP +G+YSF FHV
Sbjct: 71  RVAFAAVRSHHHEPAGETGNGTSGAIYFDQVLVNEGGGFDRASGSFVAPVRGVYSFRFHV 130

Query: 150 VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMG 209
           VKVYNRQT+QVSLM N +PVISAFA D DVTREAA++ VLL ++  D+V L+L RGNL+G
Sbjct: 131 VKVYNRQTVQVSLMLNTWPVISAFANDPDVTREAATSSVLLPLDPGDRVSLRLRRGNLLG 190

Query: 210 GWKYSTFSGFLVFPL 224
           GWKYS+FSGFL+FPL
Sbjct: 191 GWKYSSFSGFLIFPL 205


>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
          Length = 1127

 Score = 94.0 bits (232), Expect = 9e-20
 Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 92   KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
            +VAFSA R++N  P  +      I FD +L N+G  FDL    F  P  G Y F FH++K
Sbjct: 997  RVAFSAARTSNLAPGTLDQ---PIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 1053

Query: 152  VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMG-G 210
            +     + V+LM+N   ++SA+A D     E ASN  +L + + D++ L+L RG + G  
Sbjct: 1054 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 1113

Query: 211  WKYSTFSGFLVF 222
            WKYSTFSG+L++
Sbjct: 1114 WKYSTFSGYLLY 1125


>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
          Length = 793

 Score = 94.0 bits (232), Expect = 9e-20
 Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           +VAFSA R++N  P  +      I FD +L N+G  FDL    F  P  G Y F FH++K
Sbjct: 663 RVAFSAARTSNLAPGTLDQ---PIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 719

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMG-G 210
           +     + V+LM+N   ++SA+A D     E ASN  +L + + D++ L+L RG + G  
Sbjct: 720 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 779

Query: 211 WKYSTFSGFLVF 222
           WKYSTFSG+L++
Sbjct: 780 WKYSTFSGYLLY 791


>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
          Length = 1077

 Score = 94.0 bits (232), Expect = 9e-20
 Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 92   KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
            +VAFSA R++N  P  +      I FD +L N+G  FDL    F  P  G Y F FH++K
Sbjct: 947  RVAFSAARTSNLAPGTLDQ---PIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLK 1003

Query: 152  VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMG-G 210
            +     + V+LM+N   ++SA+A D     E ASN  +L + + D++ L+L RG + G  
Sbjct: 1004 LAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSS 1063

Query: 211  WKYSTFSGFLVF 222
            WKYSTFSG+L++
Sbjct: 1064 WKYSTFSGYLLY 1075


>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
           sapiens]
          Length = 287

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 11/153 (7%)

Query: 74  ADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASS 133
           ++G VTS+L  S      K+AF     + HE  E+      + FD V+ N+GNH+D  + 
Sbjct: 142 SEGEVTSAL--SATFSGPKIAFYVGLKSPHEGYEV------LKFDDVVTNLGNHYDPTTG 193

Query: 134 IFVAPRKGIYSFSFHV-VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLM 192
            F    +GIY F++H+ ++  +  ++   L +NG    SA A D D   + ASN V+L +
Sbjct: 194 KFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHL 253

Query: 193 EREDKVHLKLERGNLMGG--WKYSTFSGFLVFP 223
           +  D+V++KL+ G   GG   KYSTFSGFL++P
Sbjct: 254 DSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYP 286


>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
           sapiens]
          Length = 238

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 9/135 (6%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHV-V 150
           ++AF A     HE  E+      + FD V+ N+GN ++ AS  F  P  G+Y F++HV +
Sbjct: 109 RIAFYAGLRRPHEGYEV------LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLM 162

Query: 151 KVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG 210
           +  +  ++   LM+NG    SA A D D   + ASN V+L ++  D+V +KL+ G + GG
Sbjct: 163 RGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGG 222

Query: 211 --WKYSTFSGFLVFP 223
              KYSTFSGF+++P
Sbjct: 223 NTNKYSTFSGFIIYP 237


>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
           sapiens]
          Length = 255

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 10/155 (6%)

Query: 72  PSADGA-VTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDL 130
           P A G     ++  +  S   K+AF A     HE  E+      + FD V+ N+GNH+D 
Sbjct: 105 PGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEV------LKFDDVVTNLGNHYDP 158

Query: 131 ASSIFVAPRKGIYSFSFHV-VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVL 189
            +  F     GIY F++HV ++  +  ++   L +N     SA A D D   + ASN V+
Sbjct: 159 TTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVV 218

Query: 190 LLMEREDKVHLKLERGNLMGG--WKYSTFSGFLVF 222
           L +E  D+V++KL+ G   GG   KYSTFSGF+++
Sbjct: 219 LHLEPGDEVYIKLDGGKAHGGNNNKYSTFSGFIIY 253


>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
           sapiens]
          Length = 258

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 11/154 (7%)

Query: 72  PSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLA 131
           P A G+   ++  +  +   +VAF A     HE  E+      + FD V+ N+GN++D A
Sbjct: 111 PGAGGS--GAISTATYTTVPRVAFYAGLKNPHEGYEV------LKFDDVVTNLGNNYDAA 162

Query: 132 SSIFVAPRKGIYSFSFHV-VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLL 190
           S  F     G Y F++HV ++  +  ++   L +NG    SA A D D   + ASN V+L
Sbjct: 163 SGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVIL 222

Query: 191 LMEREDKVHLKLERGNLMGG--WKYSTFSGFLVF 222
            ++  D+V +KL+ G   GG   KYSTFSGF+++
Sbjct: 223 HLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIY 256


>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
           a [Homo sapiens]
          Length = 246

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 6/132 (4%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           ++AF A+ +T+      SN+   I F  V  NIGN FD+ +  F AP  G+Y F+F ++K
Sbjct: 117 QIAFMASLATH-----FSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMK 171

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG- 210
             + + + V LM NG  V S ++ +     + +SN  +L + + D+V L++  G L G  
Sbjct: 172 HEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDH 231

Query: 211 WKYSTFSGFLVF 222
            ++STF+GFL+F
Sbjct: 232 QRFSTFAGFLLF 243


>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
           b [Homo sapiens]
          Length = 319

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 6/132 (4%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           ++AF A+ +T+      SN+   I F  V  NIGN FD+ +  F AP  G+Y F+F ++K
Sbjct: 190 QIAFMASLATH-----FSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMK 244

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG- 210
             + + + V LM NG  V S ++ +     + +SN  +L + + D+V L++  G L G  
Sbjct: 245 HEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDH 304

Query: 211 WKYSTFSGFLVF 222
            ++STF+GFL+F
Sbjct: 305 QRFSTFAGFLLF 316


>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
           sapiens]
          Length = 329

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 94  AFSATRSTNHEPSEMSN--RTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           AFSA R+ +   S+     R   + FD   VNIG  FD A+ +F     G Y FSF + K
Sbjct: 178 AFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLGK 237

Query: 152 VYNRQTIQVSLMQNGYPVISAFAGD-QDVTREAASNGVLLLMEREDKVHLKLERGNLMGG 210
           +  R+T+ V LM+N   V +    D     RE  S  V+L + R D V L     +  G 
Sbjct: 238 L-PRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGA 296

Query: 211 W----KYSTFSGFLVFP 223
           +    KY TFSGFLV+P
Sbjct: 297 YSNHGKYITFSGFLVYP 313



 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 12/148 (8%)

Query: 81  SLGISVRSGSAKV--AFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAP 138
           +LG +   GS+++  AFSA R+T  E +      M + FD+V VNIG  FD+A+  F   
Sbjct: 16  ALGPTPGPGSSELRSAFSAARTTPLEGTS----EMAVTFDKVYVNIGGDFDVATGQFRCR 71

Query: 139 RKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQD---VTREAASNGVLLLMERE 195
             G Y FSF   K  ++ ++ V L++N    + A A D+      R AAS   +L ++  
Sbjct: 72  VPGAYFFSFTAGKAPHK-SLSVMLVRN-RDEVQALAFDEQRRPGARRAASQSAMLQLDYG 129

Query: 196 DKVHLKLERGNLMG-GWKYSTFSGFLVF 222
           D V L+L        G   +TFSG+LV+
Sbjct: 130 DTVWLRLHGAPQYALGAPGATFSGYLVY 157


>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
           sapiens]
          Length = 333

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 14/125 (11%)

Query: 106 SEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQN 165
           S+  +  M I FD++L N  NH+D A+  F     G+Y F++H+  V++R  +QVSL++N
Sbjct: 212 SKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHIT-VFSR-NVQVSLVKN 269

Query: 166 GYPVI---SAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGW-----KYSTFS 217
           G  ++    A+   +D     AS G++L ++  D+V L++  G    G        +TF+
Sbjct: 270 GVKILHTKDAYMSSED----QASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFT 325

Query: 218 GFLVF 222
           GFL+F
Sbjct: 326 GFLLF 330


>gi|14149712 C1q and tumor necrosis factor related protein 5
           precursor [Homo sapiens]
          Length = 243

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 10/134 (7%)

Query: 94  AFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVY 153
           AFSA RS +  P         + FD+VLVN   H+D  +  F     G+Y F+ H   VY
Sbjct: 105 AFSAKRSESRVPPPSD---APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHAT-VY 160

Query: 154 NRQTIQVSLMQNGYPVISAFAGDQDVTREAA-SNGVLLLMEREDKVHLKLERGNLMGGWK 212
            R ++Q  L++NG  + S F       + A+ S G ++ +E ED+V +++  G+ +G + 
Sbjct: 161 -RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYA 219

Query: 213 Y----STFSGFLVF 222
                STFSGFLV+
Sbjct: 220 SIKTDSTFSGFLVY 233


>gi|87298828 complement component 1, q subcomponent, B chain
           precursor [Homo sapiens]
          Length = 253

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 11/156 (7%)

Query: 72  PSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLA 131
           P A GA            + K+AFSATR+ N        R  TI FD V+ N+ N+++  
Sbjct: 101 PGAPGAPGPKGESGDYKATQKIAFSATRTINVP----LRRDQTIRFDHVITNMNNNYEPR 156

Query: 132 SSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPV--ISAFAGDQDVTREAASNGVL 189
           S  F     G+Y F++H     +R  + V+LM+       +  F      T +  + G++
Sbjct: 157 SGKFTCKVPGLYYFTYH---ASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMV 213

Query: 190 LLMEREDKVHLKLERGNLMGGWK--YSTFSGFLVFP 223
           L +E+ + V L+    N + G +   S FSGFL+FP
Sbjct: 214 LKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFP 249


>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
           sapiens]
          Length = 333

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 14/125 (11%)

Query: 106 SEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQN 165
           S+  +  + I FD++L N  NH+D A   F     G+Y F++H+  V++R  +QVSL++N
Sbjct: 212 SKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHIT-VFSR-NVQVSLVKN 269

Query: 166 GYPVI---SAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGW-----KYSTFS 217
           G  ++    A+   +D     AS  ++L ++  D++ L++  G    G        +TF+
Sbjct: 270 GVKILHTRDAYVSSED----QASGSIVLQLKLGDEMWLQVTGGERFNGLFADEDDDTTFT 325

Query: 218 GFLVF 222
           GFL+F
Sbjct: 326 GFLLF 330


>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
           b [Homo sapiens]
          Length = 289

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 19/139 (13%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           K AFS   +T++ P E     + I F++VL N G H++ A+  F+    GIY FS+ +  
Sbjct: 147 KSAFSVGITTSY-PEER----LPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITL 201

Query: 152 VYNRQTIQVSLMQNGYPVISAF---AGDQDVTREAASNGVLLLMEREDKVHLKL---ERG 205
               + + + L+ NG   I  F    G+ DV    AS   ++ ++ ED+V L++   ++ 
Sbjct: 202 A--NKHLAIGLVHNGQYRIKTFDANTGNHDV----ASGSTVIYLQPEDEVWLEIFFTDQN 255

Query: 206 NLMG--GWKYSTFSGFLVF 222
            L    GW  S FSGFL++
Sbjct: 256 GLFSDPGWADSLFSGFLLY 274


>gi|206597454 C1q and tumor necrosis factor related protein 7
           isoform b [Homo sapiens]
          Length = 289

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 19/139 (13%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           K AFS   +T++ P E     + I F++VL N G H++ A+  F+    GIY FS+ +  
Sbjct: 147 KSAFSVGITTSY-PEER----LPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITL 201

Query: 152 VYNRQTIQVSLMQNGYPVISAF---AGDQDVTREAASNGVLLLMEREDKVHLKL---ERG 205
               + + + L+ NG   I  F    G+ DV    AS   ++ ++ ED+V L++   ++ 
Sbjct: 202 A--NKHLAIGLVHNGQYRIKTFDANTGNHDV----ASGSTVIYLQPEDEVWLEIFFTDQN 255

Query: 206 NLMG--GWKYSTFSGFLVF 222
            L    GW  S FSGFL++
Sbjct: 256 GLFSDPGWADSLFSGFLLY 274


>gi|206597452 C1q and tumor necrosis factor related protein 7
           isoform a [Homo sapiens]
          Length = 296

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 19/139 (13%)

Query: 92  KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVK 151
           K AFS   +T++ P E     + I F++VL N G H++ A+  F+    GIY FS+ +  
Sbjct: 154 KSAFSVGITTSY-PEER----LPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITL 208

Query: 152 VYNRQTIQVSLMQNGYPVISAF---AGDQDVTREAASNGVLLLMEREDKVHLKL---ERG 205
               + + + L+ NG   I  F    G+ DV    AS   ++ ++ ED+V L++   ++ 
Sbjct: 209 A--NKHLAIGLVHNGQYRIKTFDANTGNHDV----ASGSTVIYLQPEDEVWLEIFFTDQN 262

Query: 206 NLMG--GWKYSTFSGFLVF 222
            L    GW  S FSGFL++
Sbjct: 263 GLFSDPGWADSLFSGFLLY 281


>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
          Length = 680

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 115 IYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHV-VKVYNRQTIQVSLMQNGYPVISAF 173
           I FD++L N   H+D  + IF     GIY FS+HV VK  +   + V L +NG PV+  +
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTH---VWVGLYKNGTPVMYTY 625

Query: 174 AGDQDVTREAASNGVLLLMEREDKVHLKL----ERGNLMGGWKYSTFSGFLVFPL 224
                   + AS   ++ +   D+V L+L      G     + +S+FSGFLV P+
Sbjct: 626 DEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAPM 680


>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
           sapiens]
          Length = 330

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 19/146 (13%)

Query: 85  SVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYS 144
           S  SG  K AFS   + ++ P E     + I FD++L+N G H++ +S  FV    GIY 
Sbjct: 187 SCGSGHTKSAFSVAVTKSY-PRER----LPIKFDKILMNEGGHYNASSGKFVCGVPGIYY 241

Query: 145 FSFHVVKVYNRQTIQVSLMQNGYPVISAF---AGDQDVTREAASNGVLLLMEREDKVHLK 201
           F++ +      + + + L+ NG   I  F    G+ DV    AS   +L +++ D+V L+
Sbjct: 242 FTYDITLA--NKHLAIGLVHNGQYRIRTFDANTGNHDV----ASGSTILALKQGDEVWLQ 295

Query: 202 L---ERGNLMGG--WKYSTFSGFLVF 222
           +   E+  L     W  S F+GFL++
Sbjct: 296 IFYSEQNGLFYDPYWTDSLFTGFLIY 321


>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 87  RSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFS 146
           R  S   AFS  R    +P   ++   T+ FD   VN+ +HF++ +  F     G+Y FS
Sbjct: 140 RCKSHYAAFSVGRK---KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFS 196

Query: 147 FHVVKVYNRQTIQVSLMQNGYPVISAFA--GDQDVTREAASNGVLLLMEREDKVHLKLER 204
            + V  +N++   + +M+N   V+  FA  GD+ + +   S  ++L +  +D+V ++L +
Sbjct: 197 LN-VHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLELREQDQVWVRLYK 252

Query: 205 GNLMGGW------KYSTFSGFLV 221
           G             Y TFSG+LV
Sbjct: 253 GERENAIFSEELDTYITFSGYLV 275


>gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo
           sapiens]
          Length = 199

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 87  RSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFS 146
           R  S   AFS  R    +P   ++   T+ FD   VN+ +HF++ +  F     G+Y FS
Sbjct: 58  RCKSHYAAFSVGRK---KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFS 114

Query: 147 FHVVKVYNRQTIQVSLMQNGYPVISAFA--GDQDVTREAASNGVLLLMEREDKVHLKLER 204
            + V  +N++   + +M+N   V+  FA  GD+ + +   S  ++L +  +D+V ++L +
Sbjct: 115 LN-VHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLELREQDQVWVRLYK 170

Query: 205 GNLMGGW------KYSTFSGFLV 221
           G             Y TFSG+LV
Sbjct: 171 GERENAIFSEELDTYITFSGYLV 193


>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 87  RSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFS 146
           R  S   AFS  R    +P   ++   T+ FD   VN+ +HF++ +  F     G+Y FS
Sbjct: 140 RCKSHYAAFSVGRK---KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFS 196

Query: 147 FHVVKVYNRQTIQVSLMQNGYPVISAFA--GDQDVTREAASNGVLLLMEREDKVHLKLER 204
            + V  +N++   + +M+N   V+  FA  GD+ + +   S  ++L +  +D+V ++L +
Sbjct: 197 LN-VHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLELREQDQVWVRLYK 252

Query: 205 GNLMGGW------KYSTFSGFLV 221
           G             Y TFSG+LV
Sbjct: 253 GERENAIFSEELDTYITFSGYLV 275


>gi|56786155 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 95  FSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYN 154
           F+ TR T+  P+  S     I F+ VL N    +D ++  F     G+Y F +H     N
Sbjct: 122 FTVTRQTHQPPAPNS----LIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTAN 177

Query: 155 RQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG--WK 212
              + V L ++G  V++ F G    T +  S GVLL ++  ++V L +     M G    
Sbjct: 178 ---LCVLLYRSGVKVVT-FCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGS 233

Query: 213 YSTFSGFLVFP 223
            S FSGFL+FP
Sbjct: 234 DSVFSGFLLFP 244


>gi|166235903 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 95  FSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYN 154
           F+ TR T+  P+  S     I F+ VL N    +D ++  F     G+Y F +H     N
Sbjct: 122 FTVTRQTHQPPAPNS----LIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTAN 177

Query: 155 RQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG--WK 212
              + V L ++G  V++ F G    T +  S GVLL ++  ++V L +     M G    
Sbjct: 178 ---LCVLLYRSGVKVVT-FCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGS 233

Query: 213 YSTFSGFLVFP 223
            S FSGFL+FP
Sbjct: 234 DSVFSGFLLFP 244


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 83  GISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGI 142
           G+   S  A  AF+A  ++    S M      + FD+ L N  + ++ A+ IF  P  G+
Sbjct: 565 GLGELSAHATPAFTAVLTSPFPASGMP-----VKFDRTLYNGHSGYNPATGIFTCPVGGV 619

Query: 143 YSFSFHV-VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLK 201
           Y F++HV VK  N   + V+L +N  P    +   +    + AS G +L +   D+V ++
Sbjct: 620 YYFAYHVHVKGTN---VWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQ 676

Query: 202 LERGNLMGGWK----YSTFSGFLVFP 223
           +      G +     +S+FSGFL+ P
Sbjct: 677 MPSDQANGLYSTEYIHSSFSGFLLCP 702


>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 67  VCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPS-EMSNRTMT----------- 114
           V   +P   G     +G+ +       A+ A +  N  P+ EM   T             
Sbjct: 573 VMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAP 632

Query: 115 IYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFA 174
           + F+++L N   +++  + IF     G+Y F++HV        + V+L +N  PV+  + 
Sbjct: 633 VKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHV--HCKGGNVWVALFKNNEPVMYTYD 690

Query: 175 GDQDVTREAASNGVLLLMEREDKVHLKL----ERGNLMGGWKYSTFSGFLVFPL 224
             +    + AS   +LL+   D+V L++      G   G + +S+FSG+L++P+
Sbjct: 691 EYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM 744


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,360,931
Number of Sequences: 37866
Number of extensions: 352037
Number of successful extensions: 1088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 63
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.