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Search of human proteins with 32483367
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32483367 origin recognition complex, subunit 3 isoform 2
[Homo sapiens]
(711 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32483367 origin recognition complex, subunit 3 isoform 2 [Hom... 1423 0.0
gi|32483369 origin recognition complex, subunit 3 isoform 1 [Hom... 1418 0.0
gi|56550043 sarcolemma associated protein [Homo sapiens] 35 0.18
gi|34916028 solute carrier family 16 (monocarboxylic acid transp... 35 0.24
gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo sap... 35 0.24
gi|53729363 leucine rich repeat and sterile alpha motif containi... 34 0.41
gi|53729361 leucine rich repeat and sterile alpha motif containi... 34 0.41
gi|53729359 leucine rich repeat and sterile alpha motif containi... 34 0.41
gi|9910352 SH3-domain GRB2-like endophilin B2 [Homo sapiens] 34 0.41
gi|145309324 FH2 domain containing 1 [Homo sapiens] 34 0.54
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 33 0.92
gi|17505200 transient receptor potential cation channel, subfami... 32 1.6
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 32 2.0
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 32 2.0
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 32 2.0
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 32 2.7
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 2.7
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 2.7
gi|238908495 similar to pleckstrin homology domain protein (5V32... 31 3.5
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 31 3.5
gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a... 31 3.5
gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b... 31 3.5
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 31 4.5
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 31 4.5
gi|124028529 symplekin [Homo sapiens] 31 4.5
gi|21264353 SWI/SNF related, matrix associated, actin dependent ... 30 5.9
gi|51477704 SWI/SNF related, matrix associated, actin dependent ... 30 5.9
gi|51477702 SWI/SNF related, matrix associated, actin dependent ... 30 5.9
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 30 5.9
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 30 5.9
>gi|32483367 origin recognition complex, subunit 3 isoform 2 [Homo
sapiens]
Length = 711
Score = 1423 bits (3683), Expect = 0.0
Identities = 711/711 (100%), Positives = 711/711 (100%)
Query: 1 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER 60
MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
Sbjct: 1 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER 60
Query: 61 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS 120
LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
Sbjct: 61 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS 120
Query: 121 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS 180
LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
Sbjct: 121 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS 180
Query: 181 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH 240
MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
Sbjct: 181 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH 240
Query: 241 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF 300
LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
Sbjct: 241 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF 300
Query: 301 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN 360
KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
Sbjct: 301 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN 360
Query: 361 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH 420
NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
Sbjct: 361 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH 420
Query: 421 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK 480
KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
Sbjct: 421 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK 480
Query: 481 SYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELR 540
SYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELR
Sbjct: 481 SYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELR 540
Query: 541 RSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALH 600
RSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALH
Sbjct: 541 RSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALH 600
Query: 601 TALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAE 660
TALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAE
Sbjct: 601 TALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAE 660
Query: 661 KMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC 711
KMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
Sbjct: 661 KMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC 711
>gi|32483369 origin recognition complex, subunit 3 isoform 1 [Homo
sapiens]
Length = 712
Score = 1418 bits (3671), Expect = 0.0
Identities = 711/712 (99%), Positives = 711/712 (99%), Gaps = 1/712 (0%)
Query: 1 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER 60
MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
Sbjct: 1 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER 60
Query: 61 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS 120
LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
Sbjct: 61 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS 120
Query: 121 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS 180
LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
Sbjct: 121 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS 180
Query: 181 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH 240
MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
Sbjct: 181 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH 240
Query: 241 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF 300
LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
Sbjct: 241 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF 300
Query: 301 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN 360
KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
Sbjct: 301 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN 360
Query: 361 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH 420
NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
Sbjct: 361 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH 420
Query: 421 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK 480
KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
Sbjct: 421 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK 480
Query: 481 SYCENHLGSTAKRIEEFLAQFQSLD-ETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL 539
SYCENHLGSTAKRIEEFLAQFQSLD ETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL
Sbjct: 481 SYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL 540
Query: 540 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL 599
RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL
Sbjct: 541 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL 600
Query: 600 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA 659
HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA
Sbjct: 601 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA 660
Query: 660 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC 711
EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
Sbjct: 661 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC 712
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 35.4 bits (80), Expect = 0.18
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 510 EEDASGSQPKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEV 550
++D G+Q + K ++ HL+K L+E +EL R+ KQ FE+
Sbjct: 466 KDDLQGAQSEIEAKQEIQHLRKELIEAQELARTSKQKCFEL 506
>gi|34916028 solute carrier family 16 (monocarboxylic acid
transporters), member 9 [Homo sapiens]
Length = 509
Score = 35.0 bits (79), Expect = 0.24
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 47/260 (18%)
Query: 116 LTFGSLTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKE---EESVHV 172
L GSL LQ++ P + +D PD K+ + + ++ ++I K EE +
Sbjct: 182 LACGSLMRPLQSSDCPLPKKIAPEDLPD-KYSIYNEKGKNLEENINILDKSYSSEEKCRI 240
Query: 173 TQRKTHYSMDSLSSWYMTVTQKTDPKMLSK---------KRTTSSQWQ------------ 211
T + DSL TVT +P+ K K+ +WQ
Sbjct: 241 TLANGDWKQDSLLHKNPTVTHTKEPETYKKKVAEQTYFCKQLAKRKWQLYKNYCGETVAL 300
Query: 212 -------SPPVVVILKDMESFATKVLQDFIIISSQHLHE---FPLILIFGIATSPIIIHR 261
+ + ++L D+ F +L + + SS E PLI I GI T+ + +
Sbjct: 301 FKNKVFSALFIAILLFDIGGFPPSLLMEDVARSSNVKEEEFIMPLISIIGIMTA---VGK 357
Query: 262 LLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPFKINEKVLQVLTNI--FLYHDF 319
LL ++ I ++ T++ L PF + L +L+ I FL ++
Sbjct: 358 LLLGILADFKWINTLYL-----YVATLIIMGLALCAIPFAKSYVTLALLSGILGFLTGNW 412
Query: 320 SVQNFI--KGLQLSLLEHFY 337
S+ ++ K + + L H Y
Sbjct: 413 SIFPYVTTKTVGIEKLAHAY 432
>gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 620
Score = 35.0 bits (79), Expect = 0.24
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 42/218 (19%)
Query: 348 LPEAKRRINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHV 407
L E R+ S+ E+ R+ P R E QA L ++LKEETQL L+
Sbjct: 309 LQEEMERVKEESSYILESNRKGPKQDRTAEGQA------LSEARKHLKEETQLRLDVEKE 362
Query: 408 YHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIWDSEE-YASVLQLLRML--A 464
M + RQ EL LEK++ + ++ S+ Q L L
Sbjct: 363 LEMQISM------------------RQEMELAMKMLEKDVCEKQDALVSLRQQLDDLRAL 404
Query: 465 KDELMTILEKCFKVFKSYCE---------NHLGSTAKRIEEFLAQFQSLDETKEEEDASG 515
K EL L+ K E N + +T K++E+ L Q + ++ E ++
Sbjct: 405 KHELAFKLQSSDLGVKQKSELNSRLEEKTNQMAATIKQLEQRLRQAERSRQSAELDNRLF 464
Query: 516 SQPKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEVLRE 553
Q G + L LE++EL R + Q + E+ +E
Sbjct: 465 KQDFGDKINSLQ------LEVEELTRQRNQLELELKQE 496
>gi|53729363 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 34.3 bits (77), Expect = 0.41
Identities = 33/159 (20%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 24 LPI--EDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEE--LNKNLFDNLIEFLQK 79
LPI +D ++ P+ RF +L WQ S+ E+ +E+ L K F+ +E Q+
Sbjct: 220 LPILEQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQR 279
Query: 80 SHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSLQAK 139
H+ + S +I L+ + L +++H + + LQ + ++ ++
Sbjct: 280 EHTQLLQQSSSQKDEI-LQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSR 338
Query: 140 DCPDMK-HFLQKLISQLMDCCVDIKSKEEESVHVTQRKT 177
++ + QK S+++ + + + E+ + +TQ +T
Sbjct: 339 IQKLLQDNQRQKKSSEILKSLENERIRMEQLMSITQEET 377
>gi|53729361 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 34.3 bits (77), Expect = 0.41
Identities = 33/159 (20%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 24 LPI--EDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEE--LNKNLFDNLIEFLQK 79
LPI +D ++ P+ RF +L WQ S+ E+ +E+ L K F+ +E Q+
Sbjct: 220 LPILEQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQR 279
Query: 80 SHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSLQAK 139
H+ + S +I L+ + L +++H + + LQ + ++ ++
Sbjct: 280 EHTQLLQQSSSQKDEI-LQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSR 338
Query: 140 DCPDMK-HFLQKLISQLMDCCVDIKSKEEESVHVTQRKT 177
++ + QK S+++ + + + E+ + +TQ +T
Sbjct: 339 IQKLLQDNQRQKKSSEILKSLENERIRMEQLMSITQEET 377
>gi|53729359 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 34.3 bits (77), Expect = 0.41
Identities = 33/159 (20%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 24 LPI--EDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEE--LNKNLFDNLIEFLQK 79
LPI +D ++ P+ RF +L WQ S+ E+ +E+ L K F+ +E Q+
Sbjct: 220 LPILEQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQR 279
Query: 80 SHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSLQAK 139
H+ + S +I L+ + L +++H + + LQ + ++ ++
Sbjct: 280 EHTQLLQQSSSQKDEI-LQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSR 338
Query: 140 DCPDMK-HFLQKLISQLMDCCVDIKSKEEESVHVTQRKT 177
++ + QK S+++ + + + E+ + +TQ +T
Sbjct: 339 IQKLLQDNQRQKKSSEILKSLENERIRMEQLMSITQEET 377
>gi|9910352 SH3-domain GRB2-like endophilin B2 [Homo sapiens]
Length = 395
Score = 34.3 bits (77), Expect = 0.41
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 376 VEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKY 429
V+K E +VA +R E T+LLLE + H+N+ LRCLH+F S Y
Sbjct: 214 VDKAEQELRVAQTEFDRQA-EVTRLLLEGISSTHVNH---LRCLHEFVKSQTTY 263
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 33.9 bits (76), Expect = 0.54
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 434 QIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFKSYCENHLGSTAKR 493
++REL C W E L+ +D+ L++CF++F+ +C +
Sbjct: 411 KLRELEC-------WKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFNKAVKDN 463
Query: 494 IEEFLAQFQSLDETKEEEDASGSQPKG 520
+ + + L KE+E S G
Sbjct: 464 HDREAQELRQLQRLKEQEQKQRSWATG 490
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 33.1 bits (74), Expect = 0.92
Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 32/254 (12%)
Query: 353 RRINFLSNNQCE-------NIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENL 405
R FL N C+ R L + +EK+ + L NE E ++L EN
Sbjct: 108 RDTRFLRNEICQLEKQLEQKDRELEDMEKELEKEKKVNEQLALRNEEAENENSKLRRENK 167
Query: 406 HVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVL-----QLL 460
+ N + + Y +QI T L + DS +Y S L +L+
Sbjct: 168 RLKKKN--------EQLCQDIIDYQ--KQIDSQKETLLSRRGEDS-DYRSQLSKKNYELI 216
Query: 461 RMLAKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKG 520
+ L + + +T + +V +L + + +E+ ++ + + D Q K
Sbjct: 217 QYLDEIQTLTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQTDNVIDQLK- 275
Query: 521 LQKTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVY 580
++ D Y LQ + E+ +L +SK + + ++ ++ V E+ L ++ + Y
Sbjct: 276 -KENDHYQLQ--VQELTDLLKSKNEED-----DPIMVAVNAKVEEWKLILSSKDDEIIEY 327
Query: 581 FSAAHALREHLNAA 594
H LRE L A
Sbjct: 328 QQMLHNLREKLKNA 341
>gi|17505200 transient receptor potential cation channel, subfamily
V, member 5 [Homo sapiens]
Length = 729
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 484 ENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELRRSK 543
ENH R+ ++ F++ D+ ++E S QP G + L + L L R+
Sbjct: 634 ENHNDQNPLRVLRYVEVFKNSDKEDDQEHPSEKQPSGAESGTLARASLA-LPTSSLSRTA 692
Query: 544 KQTK----FEVLRENVVNFID 560
Q+ +E+LR+N + ++
Sbjct: 693 SQSSSHRGWEILRQNTLGHLN 713
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 32.0 bits (71), Expect = 2.0
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 17/166 (10%)
Query: 32 KGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNL------FDNLIEFLQKSHSGFQ 85
+GK + E + + E Q +E ER++ EL + DN+ L +S S
Sbjct: 1238 QGKGDSEHKRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQSDSKSS 1297
Query: 86 KNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSLQAKDCPDMK 145
K ++D ++ + T L+ N L+ + + +++ + L+ ++ + K
Sbjct: 1298 KLTKDFSA-LESQLQDTQELLQEEN--RQKLSLSTKLKQVEDEKNSFREQLEEEE--EAK 1352
Query: 146 HFLQKLISQLMDCCVDIKSKEEESV------HVTQRKTHYSMDSLS 185
H L+K I+ L D+K K E+SV +RK ++ LS
Sbjct: 1353 HNLEKQIATLHAQVADMKKKMEDSVGCLETAEEVKRKLQKDLEGLS 1398
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 458 QLLRML--AKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASG 515
QL++ L KDE + K FK+ + E L K +E +A+ ++D T+ + +
Sbjct: 1229 QLIQKLNCEKDEAIQTALKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLV 1288
Query: 516 SQ-PKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVRE 565
++ + LQ+ L++ + K + + ++ E NF L RE
Sbjct: 1289 AELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTRE 1339
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 458 QLLRML--AKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASG 515
QL++ L KDE + K FK+ + E L K +E +A+ ++D T+ + +
Sbjct: 1229 QLIQKLNCEKDEAIQTALKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLV 1288
Query: 516 SQ-PKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVRE 565
++ + LQ+ L++ + K + + ++ E NF L RE
Sbjct: 1289 AELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTRE 1339
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 31.6 bits (70), Expect = 2.7
Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 15 PNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMK-----SENERLQEELNK-- 67
P S+K+ P E+ NE +L+F + + K E +R + EL K
Sbjct: 507 PKSEKKAQQTPTEE-----DNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYR 561
Query: 68 NLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQ- 126
+ + +L L K +G ++R+ +++LR + A +LG + + ++ L L
Sbjct: 562 SFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDD 621
Query: 127 ------NNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS 180
N ++ Q++ +++ LQ + + ++ EE++ +T Y
Sbjct: 622 LRGDDFNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYK 681
Query: 181 MDS 183
S
Sbjct: 682 YKS 684
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 31.6 bits (70), Expect = 2.7
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 330 LSLLEHFYSQPLSVLCCNLPEAKRRINFLSNNQCENIRRLPSFRRYVE-------KQASE 382
L ++H + + S+ C L E + L ++ E +++ + +E ++ +
Sbjct: 443 LDRIKHQHREQGSIKC-KLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEALRQEFKK 501
Query: 383 KQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTC 442
K L N R L+EE + L L C + SSL KY +Q+ +
Sbjct: 502 KDKTLKENSRKLEEENENLRAELQC----------CSTQLESSLNKYNTSQQVIQ----D 547
Query: 443 LEKNIWDSEEYASVLQ--LLRMLAKDE---LMTILEKCFKVFK---SYCE---------- 484
L K I +E LQ L + L K++ TI ++ + + C+
Sbjct: 548 LNKEIALQKESLMSLQAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQALEKL 607
Query: 485 NHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHL----QKSLLEMKELR 540
NH+ S K +++ L Q Q EEE + + T+L L Q+S LE+
Sbjct: 608 NHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFD 667
Query: 541 RSKKQTKFEVLR 552
+ ++ +VL+
Sbjct: 668 KKLEEMSCQVLQ 679
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 31.6 bits (70), Expect = 2.7
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 330 LSLLEHFYSQPLSVLCCNLPEAKRRINFLSNNQCENIRRLPSFRRYVE-------KQASE 382
L ++H + + S+ C L E + L ++ E +++ + +E ++ +
Sbjct: 588 LDRIKHQHREQGSIKC-KLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEALRQEFKK 646
Query: 383 KQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTC 442
K L N R L+EE + L L C + SSL KY +Q+ +
Sbjct: 647 KDKTLKENSRKLEEENENLRAELQC----------CSTQLESSLNKYNTSQQVIQ----D 692
Query: 443 LEKNIWDSEEYASVLQ--LLRMLAKDE---LMTILEKCFKVFK---SYCE---------- 484
L K I +E LQ L + L K++ TI ++ + + C+
Sbjct: 693 LNKEIALQKESLMSLQAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQALEKL 752
Query: 485 NHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPKGLQKTDLYHL----QKSLLEMKELR 540
NH+ S K +++ L Q Q EEE + + T+L L Q+S LE+
Sbjct: 753 NHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFD 812
Query: 541 RSKKQTKFEVLR 552
+ ++ +VL+
Sbjct: 813 KKLEEMSCQVLQ 824
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 31.2 bits (69), Expect = 3.5
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 487 LGSTAKRIEEFLAQFQ-SLDETKEEEDASGSQPKGLQ--KTDLYHLQKSLLE-MKELRRS 542
L + ++ EE + + + ++ K E + + KG++ K +L HL +SL + ++EL
Sbjct: 194 LEAEKQQFEEVVQELRMEQEQIKRELELTARCLKGVEQEKKELRHLTESLQQTLEELSIE 253
Query: 543 KKQTKFEVLRENVVNFIDCLVREYLLPPETQPLH 576
KK+T E+L EN N + L + PP + LH
Sbjct: 254 KKKT-LEMLEEN-ENHLQTLANQSEQPPPSGGLH 285
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 31.2 bits (69), Expect = 3.5
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 493 RIEEFLAQFQSLDETK-EEEDASGSQPKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEVL 551
++++ LA+ + +E + E+ Q K ++ +Q+ L +KEL ++K KF++
Sbjct: 668 KLKDLLAEKEKFEEERLREQQEIELQKKRQEEETFLRVQEELQRLKELNNNEKAEKFQIF 727
Query: 552 RE 553
+E
Sbjct: 728 QE 729
>gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a
[Homo sapiens]
Length = 1071
Score = 31.2 bits (69), Expect = 3.5
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 465 KDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDE----TKEEEDASGSQPKG 520
+D+LM +L + + V K+Y + S + + + A+ Q + K+E+ + P
Sbjct: 150 QDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQEEKQIGKSVKQEDRQTPRSPDS 209
Query: 521 LQ--KTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEV 578
+ + H+++S ++ E + K+Q K+ EN + I EYLL E
Sbjct: 210 TANVRIEEKHVRRSSVKKIEKMKEKRQAKY---TENKLKAIKAR-NEYLLALEATNASVF 265
Query: 579 VYFSAAHALREHLNAAPRIALHTALN 604
Y+ H L + ++ + H +LN
Sbjct: 266 KYY--IHDLSDLIDQCCDLGYHASLN 289
>gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b
[Homo sapiens]
Length = 836
Score = 31.2 bits (69), Expect = 3.5
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 465 KDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDE----TKEEEDASGSQPKG 520
+D+LM +L + + V K+Y + S + + + A+ Q + K+E+ + P
Sbjct: 150 QDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQEEKQIGKSVKQEDRQTPRSPDS 209
Query: 521 LQ--KTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEV 578
+ + H+++S ++ E + K+Q K+ EN + I EYLL E
Sbjct: 210 TANVRIEEKHVRRSSVKKIEKMKEKRQAKY---TENKLKAIKAR-NEYLLALEATNASVF 265
Query: 579 VYFSAAHALREHLNAAPRIALHTALN 604
Y+ H L + ++ + H +LN
Sbjct: 266 KYY--IHDLSDLIDQCCDLGYHASLN 289
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 30.8 bits (68), Expect = 4.5
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 487 LGSTAKRIEEFLAQFQSLDETKE-------EEDASGSQPKGLQKTDLYHLQKSLLEMKEL 539
+GS K+++E A Q LD+ ++ S+P D +QK L E ++L
Sbjct: 6010 IGSRVKKLKETFAFIQQLDKNMSNLRTWLARIESELSKPVVYDVCDDQEIQKRLAEQQDL 6069
Query: 540 RRSKKQTKFEVLRENVVNFIDCLVRE 565
+R +Q V E+V N D L+ +
Sbjct: 6070 QRDIEQHSAGV--ESVFNICDVLLHD 6093
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 30.8 bits (68), Expect = 4.5
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 487 LGSTAKRIEEFLAQFQSLDETKE-------EEDASGSQPKGLQKTDLYHLQKSLLEMKEL 539
+GS K+++E A Q LD+ ++ S+P D +QK L E ++L
Sbjct: 6010 IGSRVKKLKETFAFIQQLDKNMSNLRTWLARIESELSKPVVYDVCDDQEIQKRLAEQQDL 6069
Query: 540 RRSKKQTKFEVLRENVVNFIDCLVRE 565
+R +Q V E+V N D L+ +
Sbjct: 6070 QRDIEQHSAGV--ESVFNICDVLLHD 6093
>gi|124028529 symplekin [Homo sapiens]
Length = 1274
Score = 30.8 bits (68), Expect = 4.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 414 LVLRCLHKFTSSLPKYP-LGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTIL 472
LV RCLH T +P P L +++R+LY L + ++ +L L K E++ L
Sbjct: 855 LVTRCLHSLTDKVPPSPELVKRVRDLYHKRL-------PDVRFLIPVLNGLEKKEVIQAL 907
Query: 473 EKCFKV 478
K K+
Sbjct: 908 PKLIKL 913
>gi|21264353 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 30.4 bits (67), Expect = 5.9
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 14 KPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNL 73
+P +KRK+ L I + FN K + EDS +++L + ++ Q+ + F +L
Sbjct: 136 RPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSL 195
Query: 74 IEFLQKSHSG 83
+ L K G
Sbjct: 196 VIELDKDLYG 205
>gi|51477704 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 30.4 bits (67), Expect = 5.9
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 14 KPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNL 73
+P +KRK+ L I + FN K + EDS +++L + ++ Q+ + F +L
Sbjct: 136 RPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSL 195
Query: 74 IEFLQKSHSG 83
+ L K G
Sbjct: 196 VIELDKDLYG 205
>gi|51477702 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 2
[Homo sapiens]
Length = 483
Score = 30.4 bits (67), Expect = 5.9
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 14 KPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNL 73
+P +KRK+ L I + FN K + EDS +++L + ++ Q+ + F +L
Sbjct: 149 RPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSL 208
Query: 74 IEFLQKSHSG 83
+ L K G
Sbjct: 209 VIELDKDLYG 218
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 30.4 bits (67), Expect = 5.9
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 24 LPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNLIEFLQKSHSG 83
+P+ + K + E E+ +L +E Q + ++E RLQEEL K L E L+K
Sbjct: 134 MPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAK-----LSEKLKKKQES 188
Query: 84 F 84
F
Sbjct: 189 F 189
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 30.4 bits (67), Expect = 5.9
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 24 LPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNLIEFLQKSHSG 83
+P+ + K + E E+ +L +E Q + ++E RLQEEL K L E L+K
Sbjct: 187 MPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAK-----LSEKLKKKQES 241
Query: 84 F 84
F
Sbjct: 242 F 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,475,329
Number of Sequences: 37866
Number of extensions: 1092869
Number of successful extensions: 3776
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3736
Number of HSP's gapped (non-prelim): 71
length of query: 711
length of database: 18,247,518
effective HSP length: 109
effective length of query: 602
effective length of database: 14,120,124
effective search space: 8500314648
effective search space used: 8500314648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.