SLMAP 33113

Name: SLMAP	Sequence: fasta or formatted (811aa)		NCBI GI: 56550043
Description: sarcolemma associated protein		Referenced in: Muscle
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 57 3 C cysteine 1.7 14 1 D aspartate 5.2 42 2 E glutamate 12.8 104 3 F phenylalanine 2.0 16 1 G glycine 2.5 20 2 H histidine 2.3 19 1 I isoleucine 4.1 33 2 K lysine 8.6 70 2 L leucine 12.7 103 3 M methionine 1.5 12 1 N asparagine 3.9 32 2 P proline 2.3 19 2 Q glutamine 8.5 69 2 R arginine 5.7 46 2 S serine 7.6 62 2 T threonine 5.4 44 2 V valine 4.1 33 2 W tryptophan 0.7 6 1 Y tyrosine 1.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sarcolemma associated protein TRAF3IP3 0.082 TRAF3-interacting JNK-activating modulator CCDC136 0.070 coiled-coil domain containing 136 MYH9 0.059 myosin, heavy polypeptide 9, non-muscle MYH11 0.057 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.057 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.057 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.057 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC88A 0.056 coiled-coil domain containing 88A isoform 2 MYH10 0.056 myosin, heavy polypeptide 10, non-muscle CCDC88A 0.056 coiled-coil domain containing 88A isoform 1 MYH13 0.055 myosin, heavy polypeptide 13, skeletal muscle [Homo... CGNL1 0.055 cingulin-like 1 EEA1 0.055 early endosome antigen 1, 162kD MYH4 0.055 myosin, heavy polypeptide 4, skeletal muscle TPR 0.055 nuclear pore complex-associated protein TPR CGN 0.053 cingulin MYH7B 0.053 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH2 0.052 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.052 myosin, heavy chain 2, skeletal muscle, adult [Homo... CEP135 0.052 centrosome protein 4 GOLGB1 0.052 golgi autoantigen, golgin subfamily b, macrogolgin ... CEP250 0.052 centrosomal protein 2 SYCP1 0.052 synaptonemal complex protein 1 GCC2 0.051 GRIP and coiled-coil domain-containing 2 MYH7 0.051 myosin, heavy chain 7, cardiac muscle, beta CROCC 0.051 ciliary rootlet coiled-coil MYH8 0.051 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH1 0.050 myosin, heavy chain 1, skeletal muscle, adult [Homo... CENPF 0.050 centromere protein F Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.