Guide to the Human Genome
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Name: ORC3L Sequence: fasta or formatted (711aa) NCBI GI: 32483367
Description:

origin recognition complex, subunit 3 isoform 2

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [712aa] origin recognition complex, subunit 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         35           2
 C cysteine            2.7         19           2
 D aspartate           3.7         26           1
 E glutamate           8.4         60           3
 F phenylalanine       4.8         34           1
 G glycine             2.4         17           2
 H histidine           3.4         24           1
 I isoleucine          5.5         39           3
 K lysine              8.0         57           2
 L leucine            13.6         97           3
 M methionine          2.1         15           1
 N asparagine          4.8         34           2
 P proline             3.8         27           2
 Q glutamine           5.2         37           2
 R arginine            4.2         30           2
 S serine              7.9         56           2
 T threonine           5.3         38           2
 V valine              5.3         38           3
 W tryptophan          0.8          6           1
 Y tyrosine            3.1         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   origin recognition complex, subunit 3 isoform 2 [Hom... 
ORC3L                 0.996   origin recognition complex, subunit 3 isoform 1 [Hom...
SLMAP                 0.007   sarcolemma associated protein 
SLC16A9               0.007   solute carrier family 16 (monocarboxylic acid transp...
RUFY3                 0.007   RUN and FYVE domain containing 3 isoform 1 
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.006   leucine rich repeat and sterile alpha motif containi...
SH3GLB2               0.006   SH3-domain GRB2-like endophilin B2 
FHDC1                 0.006   FH2 domain containing 1 
CEP290                0.006   centrosomal protein 290kDa 
TRPV5                 0.005   transient receptor potential cation channel, subfami...
MYH9                  0.005   myosin, heavy polypeptide 9, non-muscle 
RB1CC1                0.005   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.005   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
C6orf174              0.005   hypothetical protein LOC387104 
PMFBP1                0.005   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.005   polyamine modulated factor 1 binding protein 1 isof...
FLJ44817              0.004   similar to pleckstrin homology domain protein (5V32...
KIF16B                0.004   kinesin-like motor protein C20orf23 
SRGAP2                0.004   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.004   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
SYNE2                 0.004   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.004   spectrin repeat containing, nuclear envelope 2 isof...
SYMPK                 0.004   symplekin 
SMARCD3               0.004   SWI/SNF related, matrix associated, actin dependent ...
SMARCD3               0.004   SWI/SNF related, matrix associated, actin dependent ...
SMARCD3               0.004   SWI/SNF related, matrix associated, actin dependent ...
GRIPAP1               0.004   GRIP1 associated protein 1 isoform 2 
GRIPAP1               0.004   GRIP1 associated protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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