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Search of human proteins with 32189371
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32189371 transmembrane protein 165 [Homo sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32189371 transmembrane protein 165 [Homo sapiens] 638 0.0
gi|164698498 septin 9 isoform b [Homo sapiens] 33 0.26
gi|164698494 septin 9 isoform a [Homo sapiens] 33 0.26
gi|116256489 septin 9 isoform c [Homo sapiens] 33 0.26
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 32 0.59
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 32 0.59
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 32 0.77
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 32 0.77
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho... 31 1.7
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho... 31 1.7
gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho... 31 1.7
gi|54792138 helicase with zinc finger domain [Homo sapiens] 31 1.7
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 31 1.7
gi|164698500 septin 9 isoform e [Homo sapiens] 30 2.2
gi|164698496 septin 9 isoform e [Homo sapiens] 30 2.2
gi|8922995 phosphatidylinositol-specific phospholipase C, X doma... 30 2.9
gi|41349446 stromal interaction molecule 2 [Homo sapiens] 30 2.9
gi|20270303 ras homolog gene family, member T2 [Homo sapiens] 30 2.9
gi|4503037 cellular repressor of E1A-stimulated genes [Homo sapi... 30 2.9
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 30 2.9
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 30 3.8
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 30 3.8
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 30 3.8
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 30 3.8
gi|14251215 Kruppel-like factor 5 [Homo sapiens] 30 3.8
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 30 3.8
gi|156142178 coiled-coil domain containing 59 [Homo sapiens] 30 3.8
gi|117938768 GNAS complex locus alex [Homo sapiens] 29 5.0
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 29 5.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 29 5.0
>gi|32189371 transmembrane protein 165 [Homo sapiens]
Length = 324
Score = 638 bits (1645), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MAAAAPGNGRASAPRLLLLFLVPLLWAPAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAV 60
MAAAAPGNGRASAPRLLLLFLVPLLWAPAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAV
Sbjct: 1 MAAAAPGNGRASAPRLLLLFLVPLLWAPAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAV 60
Query: 61 QGPEPARVEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIM 120
QGPEPARVEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIM
Sbjct: 61 QGPEPARVEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIM 120
Query: 121 AMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLK 180
AMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLK
Sbjct: 121 AMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLK 180
Query: 181 MSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQA 240
MSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQA
Sbjct: 181 MSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQA 240
Query: 241 LTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV 300
LTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV
Sbjct: 241 LTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTV 300
Query: 301 TIIGGIVFLAFAFSALFISPDSGF 324
TIIGGIVFLAFAFSALFISPDSGF
Sbjct: 301 TIIGGIVFLAFAFSALFISPDSGF 324
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 33.5 bits (75), Expect = 0.26
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 37 EDLSHRNKEPPA---------PAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPAT 87
++ +HR EPPA PA P+ V +Q P+PA +PA + ++ P +
Sbjct: 151 QESAHRRMEPPASKVPEVPTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVS 210
Query: 88 Q 88
Q
Sbjct: 211 Q 211
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 33.5 bits (75), Expect = 0.26
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 37 EDLSHRNKEPPA---------PAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPAT 87
++ +HR EPPA PA P+ V +Q P+PA +PA + ++ P +
Sbjct: 158 QESAHRRMEPPASKVPEVPTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVS 217
Query: 88 Q 88
Q
Sbjct: 218 Q 218
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 33.5 bits (75), Expect = 0.26
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 37 EDLSHRNKEPPA---------PAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPAT 87
++ +HR EPPA PA P+ V +Q P+PA +PA + ++ P +
Sbjct: 140 QESAHRRMEPPASKVPEVPTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVS 199
Query: 88 Q 88
Q
Sbjct: 200 Q 200
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
Length = 2462
Score = 32.3 bits (72), Expect = 0.59
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 31 VRAGPDEDLSHRNKEPPAPA--QQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
V P ED + PPAP Q LQP+ A Q P + K +PA P E P
Sbjct: 964 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPV-- 1021
Query: 89 TNLGFIHAFVA 99
F AF A
Sbjct: 1022 ----FFPAFAA 1028
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 32.3 bits (72), Expect = 0.59
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 31 VRAGPDEDLSHRNKEPPAPA--QQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
V P ED + PPAP Q LQP+ A Q P + K +PA P E P
Sbjct: 980 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPV-- 1037
Query: 89 TNLGFIHAFVA 99
F AF A
Sbjct: 1038 ----FFPAFAA 1044
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 32.0 bits (71), Expect = 0.77
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
Query: 28 PAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAVQGPE-----PARVEKI-FTPAAPVHTN 81
PA+ R P+ + ++PP PA + P P P+ PAR+ K+ F P
Sbjct: 1095 PASERLKPETQETRPREKPPLPATKAVPTPRQSTVPKLPAVHPARLRKLSFLPT------ 1148
Query: 82 KEDPATQTNLGFIHAFVAAISV 103
P TQ + + AF++ I +
Sbjct: 1149 ---PRTQGSEDVVQAFISEIGI 1167
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 32.0 bits (71), Expect = 0.77
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 10 RASAPRLLLLFLVPLLWAPAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAVQGPEP 65
R+ A LLLL L LL A ++RAG E + + PA A Q P PV + P P
Sbjct: 4 RSKAAALLLLALAALLLALLSLRAGRAEPPALPAR--PASAPQRHPAPVPARWPGP 57
>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 30.8 bits (68), Expect = 1.7
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 46 PPAPAQQLQPQPVAVQGPEPAR----VEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAI 101
PP P P P +G +P R EK PA PV +P ++ I A A+
Sbjct: 193 PPVPPPPPPPPPTKKKGQKPGRKDTITEKPIAPAEPV-----EPVLSGSMA-IGAVSLAV 246
Query: 102 SVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTC 142
+ L + A++ + T L+ +L + L++C
Sbjct: 247 AKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSC 287
>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 30.8 bits (68), Expect = 1.7
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 46 PPAPAQQLQPQPVAVQGPEPAR----VEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAI 101
PP P P P +G +P R EK PA PV +P ++ I A A+
Sbjct: 193 PPVPPPPPPPPPTKKKGQKPGRKDTITEKPIAPAEPV-----EPVLSGSMA-IGAVSLAV 246
Query: 102 SVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTC 142
+ L + A++ + T L+ +L + L++C
Sbjct: 247 AKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSC 287
>gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 30.8 bits (68), Expect = 1.7
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 46 PPAPAQQLQPQPVAVQGPEPAR----VEKIFTPAAPVHTNKEDPATQTNLGFIHAFVAAI 101
PP P P P +G +P R EK PA PV +P ++ I A A+
Sbjct: 193 PPVPPPPPPPPPTKKKGQKPGRKDTITEKPIAPAEPV-----EPVLSGSMA-IGAVSLAV 246
Query: 102 SVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTC 142
+ L + A++ + T L+ +L + L++C
Sbjct: 247 AKACAMLLNKPLYLNIALLKHNQEQPTTLSMPLLMVSLVSC 287
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 30 AVRAGPDED-----LSHRNKEPPAPA--QQLQPQPVAVQGPEPARVEKIFTPAAPVHTN 81
A +AGP+ ++HR + PPA A + QP P+ +G P R P P H N
Sbjct: 1422 AYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLN 1480
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 35 PDEDLSHRNKEPPAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQTNLG 92
P H+ ++PP P Q +PV QGP PA +AP ++ PAT G
Sbjct: 88 PPHPQPHQQQQPPPPPQD-SSKPVVAQGPGPAP----GVGSAPPASSSAPPATPPTSG 140
>gi|164698500 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 2.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 46 PPAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P APA P+ V +Q P+PA +PA + ++ P +Q
Sbjct: 12 PTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQ 54
>gi|164698496 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 2.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 46 PPAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P APA P+ V +Q P+PA +PA + ++ P +Q
Sbjct: 12 PTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQ 54
>gi|8922995 phosphatidylinositol-specific phospholipase C, X domain
containing 1 [Homo sapiens]
Length = 323
Score = 30.0 bits (66), Expect = 2.9
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 227 KKWLHFISPIFVQAL---TLTFLAEWGDRSQLTTIVLAAR 263
+K LHF+ ++ AL TLT ++EW +R ++LA R
Sbjct: 115 EKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACR 154
>gi|41349446 stromal interaction molecule 2 [Homo sapiens]
Length = 833
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 172 IRMLREGLKMSPDEGQ---EELEEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKK 228
+R LREG + Q +ELE+V+ LKK ++EF ++ + S+ +K
Sbjct: 391 LRELREGAECELSRRQYAEQELEQVRMALKKAEKEF----------ELRSSWSVPDALQK 440
Query: 229 WLHFISPIFVQ 239
WL + VQ
Sbjct: 441 WLQLTHEVEVQ 451
>gi|20270303 ras homolog gene family, member T2 [Homo sapiens]
Length = 618
Score = 30.0 bits (66), Expect = 2.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 55 PQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQTNLGFIH-AFVAAISVIIVSELGDKT 113
P+ VAV GP PA + APV + PA + F A +AA ++ +EL +
Sbjct: 529 PEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQLATMAAFPHLVHAELHPSS 588
Query: 114 FFIAAIMAM 122
F++ ++ +
Sbjct: 589 FWLRGLLGV 597
>gi|4503037 cellular repressor of E1A-stimulated genes [Homo
sapiens]
Length = 220
Score = 30.0 bits (66), Expect = 2.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 1 MAAAAPGNGRASAPRLLLLFLVPLLWAPAAVRAGPDE-DLSHRNKEPPAPAQQ 52
MA + G+ RA LL L+ LL +PA R G D D ++ PP P ++
Sbjct: 1 MAGLSRGSARALLAALLASTLLALLVSPARGRGGRDHGDWDEASRLPPLPPRE 53
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 30.0 bits (66), Expect = 2.9
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 23 PLLWAPAAVRAGPDEDLSHRNK------EPPAPAQQLQPQPVAVQGPEPARVEKIFTPAA 76
P + PA R P ++ R +PPAP QQ QP P Q P + A
Sbjct: 188 PAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247
Query: 77 PV 78
PV
Sbjct: 248 PV 249
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 29.6 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 35 PDEDLSHRNKEP------PAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P E KEP PAP +P P A + P P TP P T ++PA
Sbjct: 322 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT------TPKEPAPTTPKEPAPT 375
Query: 89 T 89
T
Sbjct: 376 T 376
Score = 28.9 bits (63), Expect = 6.5
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 27 APAAVRAGPD--EDLSHRNKEPPAPAQQLQPQPVAVQGPEPARVEKI-FTPAAPVHTNKE 83
AP ++ P ++ + + PAP +P P + P P + TP P T +
Sbjct: 248 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 307
Query: 84 DPATQT 89
PA T
Sbjct: 308 KPAPTT 313
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 29.6 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 35 PDEDLSHRNKEP------PAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P E KEP PAP +P P A + P P TP P T ++PA
Sbjct: 363 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT------TPKEPAPTTPKEPAPT 416
Query: 89 T 89
T
Sbjct: 417 T 417
Score = 28.9 bits (63), Expect = 6.5
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 27 APAAVRAGPD--EDLSHRNKEPPAPAQQLQPQPVAVQGPEPARVEKI-FTPAAPVHTNKE 83
AP ++ P ++ + + PAP +P P + P P + TP P T +
Sbjct: 289 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 348
Query: 84 DPATQT 89
PA T
Sbjct: 349 KPAPTT 354
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 29.6 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 35 PDEDLSHRNKEP------PAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P E KEP PAP +P P A + P P TP P T ++PA
Sbjct: 415 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT------TPKEPAPTTPKEPAPT 468
Query: 89 T 89
T
Sbjct: 469 T 469
Score = 28.9 bits (63), Expect = 6.5
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 27 APAAVRAGPD--EDLSHRNKEPPAPAQQLQPQPVAVQGPEPARVEKI-FTPAAPVHTNKE 83
AP ++ P ++ + + PAP +P P + P P + TP P T +
Sbjct: 341 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 400
Query: 84 DPATQT 89
PA T
Sbjct: 401 KPAPTT 406
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 29.6 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 35 PDEDLSHRNKEP------PAPAQQLQPQPVAVQGPEPARVEKIFTPAAPVHTNKEDPATQ 88
P E KEP PAP +P P A + P P TP P T ++PA
Sbjct: 456 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT------TPKEPAPTTPKEPAPT 509
Query: 89 T 89
T
Sbjct: 510 T 510
Score = 28.9 bits (63), Expect = 6.5
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 27 APAAVRAGPD--EDLSHRNKEPPAPAQQLQPQPVAVQGPEPARVEKI-FTPAAPVHTNKE 83
AP ++ P ++ + + PAP +P P + P P + TP P T +
Sbjct: 382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 441
Query: 84 DPATQT 89
PA T
Sbjct: 442 KPAPTT 447
>gi|14251215 Kruppel-like factor 5 [Homo sapiens]
Length = 457
Score = 29.6 bits (65), Expect = 3.8
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 15/72 (20%)
Query: 21 LVPLLWAPAAVRAG---PDEDLSHRNKEP---PAPAQQLQPQPVAVQGPE---------P 65
L P+L A R P E+L H + P PAPAQ QP GP
Sbjct: 30 LKPVLGAANPARDAALFPGEELKHAHHRPQAQPAPAQAPQPAQPPATGPRLPPEDLVQTR 89
Query: 66 ARVEKIFTPAAP 77
+EK TP P
Sbjct: 90 CEMEKYLTPQLP 101
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 29.6 bits (65), Expect = 3.8
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 4 AAPGNGRASAPRLLLLFLVPLLWAPAAV---RAGPDEDLSHRNKEPPAPAQQLQPQPVAV 60
AA G A++P L P+ P ++ A P+ + R + PPA A++ P+ A
Sbjct: 503 AAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAE 562
Query: 61 QGPEPARVEKIFT 73
+G R K F+
Sbjct: 563 RGGAELRGAKKFS 575
>gi|156142178 coiled-coil domain containing 59 [Homo sapiens]
Length = 241
Score = 29.6 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 180 KMSPDEGQEELEEVQAELKKKDEEFQRTK 208
K S + QEE E++QA+ K +EF+R K
Sbjct: 166 KTSNQKAQEEYEQIQAKRAAKKQEFERRK 194
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 47 PAPAQQLQPQPVAVQG-----PEPARVEKIFTP 74
P P Q LQPQP+ G P P + + I TP
Sbjct: 328 PLPGQPLQPQPILTPGQPQKIPTPGQHQPILTP 360
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 29.3 bits (64), Expect = 5.0
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 28 PAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVAV-----QGPEPARVEKIFTPAAPVHTNK 82
P AV+ P E PP + +P+P A+ P P R F+PA P
Sbjct: 123 PQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGDPFSPAPPRPQPP 182
Query: 83 EDPATQ 88
PA Q
Sbjct: 183 SRPAAQ 188
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 29.3 bits (64), Expect = 5.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 179 LKMSPDEGQEELEEVQAELKKKDEEFQRTK 208
LKM +E + ++ E+ ++LK DEEFQ K
Sbjct: 1160 LKMLAEEDKRKVSELTSKLKTTDEEFQSLK 1189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,494,318
Number of Sequences: 37866
Number of extensions: 615992
Number of successful extensions: 3883
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 3763
Number of HSP's gapped (non-prelim): 143
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.