Guide to the Human Genome
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Name: KLF5 Sequence: fasta or formatted (457aa) NCBI GI: 14251215
Description:

Kruppel-like factor 5

Referenced in:

Adipose Tissue
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         40           2
 C cysteine            2.0          9           1
 D aspartate           3.7         17           1
 E glutamate           4.2         19           2
 F phenylalanine       3.3         15           2
 G glycine             3.3         15           1
 H histidine           4.6         21           2
 I isoleucine          2.8         13           2
 K lysine              4.2         19           2
 L leucine             7.9         36           2
 M methionine          2.6         12           1
 N asparagine          3.9         18           2
 P proline            13.3         61           3
 Q glutamine           7.0         32           2
 R arginine            5.3         24           2
 S serine              7.0         32           2
 T threonine           8.3         38           2
 V valine              4.4         20           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 5 
KLF12                 0.166   Kruppel-like factor 12 
KLF3                  0.166   Kruppel-like factor 3 (basic) 
KLF4                  0.156   Kruppel-like factor 4 (gut) 
KLF7                  0.156   Kruppel-like factor 7 (ubiquitous) 
KLF8                  0.155   Kruppel-like factor 8 isoform 1 
KLF2                  0.154   Kruppel-like factor 
KLF6                  0.154   Kruppel-like factor 6 isoform A 
KLF1                  0.147   Kruppel-like factor 1 (erythroid) 
KLF15                 0.131   Kruppel-like factor 15 
KLF11                 0.129   Kruppel-like factor 11 
KLF13                 0.126   Kruppel-like factor 13 
KLF10                 0.120   Kruppel-like factor 10 isoform b 
KLF10                 0.120   Kruppel-like factor 10 isoform a 
KLF16                 0.113   BTE-binding protein 4 
KLF14                 0.113   Kruppel-like factor 14 
KLF9                  0.108   Kruppel-like factor 9 
SP8                   0.107   Sp8 transcription factor isoform 1 
SP8                   0.107   Sp8 transcription factor isoform 2 
KLF17                 0.107   zinc finger protein 393 
SP9                   0.106   Sp9 transcription factor homolog 
WT1                   0.105   Wilms tumor 1 isoform D 
WT1                   0.105   Wilms tumor 1 isoform C 
WT1                   0.105   Wilms tumor 1 isoform B 
WT1                   0.105   Wilms tumor 1 isoform A 
SP1                   0.105   Sp1 transcription factor isoform a 
SP1                   0.105   Sp1 transcription factor isoform b 
SP6                   0.105   Sp6 transcription factor 
SP3                   0.104   Sp3 transcription factor isoform 2 
SP3                   0.104   Sp3 transcription factor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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