Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GLT8D4 Sequence: fasta or formatted (443aa) NCBI GI: 122937187
Description:

glycosyltransferase 8 domain containing 4

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         38           3
 C cysteine            1.6          7           1
 D aspartate           3.8         17           2
 E glutamate           4.7         21           2
 F phenylalanine       5.2         23           1
 G glycine             5.0         22           1
 H histidine           3.4         15           1
 I isoleucine          4.3         19           2
 K lysine              5.4         24           2
 L leucine            12.0         53           4
 M methionine          2.5         11           1
 N asparagine          3.2         14           1
 P proline             9.0         40           2
 Q glutamine           4.3         19           1
 R arginine            8.4         37           4
 S serine              4.5         20           1
 T threonine           3.2         14           1
 V valine              5.2         23           2
 W tryptophan          2.0          9           1
 Y tyrosine            3.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycosyltransferase 8 domain containing 4 
GLT8D3                0.489   glycosyltransferase 8 domain containing 3 isoform 2...
GLT8D3                0.483   glycosyltransferase 8 domain containing 3 isoform 1...
GYLTL1B               0.057   glycosyltransferase-like 1B 
LARGE                 0.032   like-glycosyltransferase 
LARGE                 0.032   like-glycosyltransferase 
C3orf21               0.023   hypothetical protein LOC152002 
HCN2                  0.018   hyperpolarization activated cyclic nucleotide-gated...
BSN                   0.018   bassoon protein 
UBXN11                0.018   socius isoform 3 
UBXN11                0.018   socius isoform 1 
UBXN11                0.018   socius isoform 2 
SAMD1                 0.018   sterile alpha motif domain containing 1 
LOC100127891          0.017   PREDICTED: hypothetical protein 
CEBPD                 0.017   CCAAT/enhancer binding protein delta 
HS6ST3                0.017   PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...
HS6ST3                0.017   heparan sulfate 6-O-sulfotransferase 3 
C22orf26              0.016   hypothetical protein LOC55267 
LOC100292865          0.016   PREDICTED: hypothetical protein 
SH3BP1                0.016   SH3-domain binding protein 1 
DACT3                 0.015   thymus expressed gene 3-like 
C11orf35              0.015   hypothetical protein LOC256329 
AGAP2                 0.013   centaurin, gamma 1 isoform PIKE-L 
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
RNF19B                0.013   ring finger protein 19B isoform a 
RNF19B                0.013   ring finger protein 19B isoform b 
LOC440829             0.013   PREDICTED: transmembrane protein 46-like 
SGK493                0.013   protein kinase-like protein SgK493 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press