Guide to the Human Genome
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Name: RHOT2 Sequence: fasta or formatted (618aa) NCBI GI: 20270303
Description:

ras homolog gene family, member T2

Referenced in:

Mitochondria
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         51           2
 C cysteine            2.9         18           1
 D aspartate           5.0         31           1
 E glutamate           7.1         44           2
 F phenylalanine       4.0         25           1
 G glycine             6.8         42           2
 H histidine           3.1         19           2
 I isoleucine          3.6         22           2
 K lysine              3.6         22           1
 L leucine            11.7         72           3
 M methionine          1.0          6           1
 N asparagine          1.6         10           1
 P proline             6.6         41           2
 Q glutamine           4.9         30           1
 R arginine            5.7         35           2
 S serine              6.1         38           2
 T threonine           6.1         38           2
 V valine              8.4         52           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member T2 
RHOT1                 0.591   ras homolog gene family, member T1 isoform 3 
RHOT1                 0.574   ras homolog gene family, member T1 isoform 2 
RHOT1                 0.564   ras homolog gene family, member T1 isoform 1 
RHOB                  0.037   ras homolog gene family, member B 
RHOF                  0.034   ras homolog gene family, member F 
RHOG                  0.033   ras homolog gene family, member G 
RHOA                  0.033   ras homolog gene family, member A 
RHOC                  0.033   ras homolog gene family, member C precursor 
RHOC                  0.033   ras homolog gene family, member C precursor 
RHOC                  0.033   ras homolog gene family, member C precursor 
CDC42                 0.032   cell division cycle 42 isoform 2 
RHOQ                  0.031   ras-like protein TC10 
CDC42                 0.031   cell division cycle 42 isoform 1 
CDC42                 0.031   cell division cycle 42 isoform 1 
RHOD                  0.031   ras homolog D 
RAC2                  0.030   ras-related C3 botulinum toxin substrate 2 
RHOU                  0.030   ras homolog gene family, member U 
RHOV                  0.029   ras homolog gene family, member V 
RAC1                  0.029   ras-related C3 botulinum toxin substrate 1 isoform Ra...
DIRAS3                0.029   DIRAS family, GTP-binding RAS-like 3 
RAC3                  0.029   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAB33A                0.027   Ras-related protein Rab-33A 
RASEF                 0.026   RAS and EF-hand domain containing 
RND3                  0.026   ras homolog gene family, member E 
RHOJ                  0.025   ras homolog gene family, member J 
REM1                  0.024   RAS-like GTP-binding protein REM 
RAC1                  0.024   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RND2                  0.023   Rho family GTPase 2 
RHOH                  0.022   ras homolog gene family, member H 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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