Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC2A4RG Sequence: fasta or formatted (387aa) NCBI GI: 31982931
Description:

SLC2A4 regulator

Referenced in:

Solute Carrier Families
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         45           4
 C cysteine            2.3          9           1
 D aspartate           3.9         15           1
 E glutamate           5.9         23           2
 F phenylalanine       2.3          9           1
 G glycine             7.2         28           3
 H histidine           1.3          5           1
 I isoleucine          0.8          3           1
 K lysine              3.1         12           2
 L leucine             9.8         38           3
 M methionine          1.6          6           1
 N asparagine          0.5          2           1
 P proline            15.5         60           4
 Q glutamine           3.4         13           1
 R arginine            7.8         30           2
 S serine              9.3         36           4
 T threonine           5.4         21           1
 V valine              4.9         19           1
 W tryptophan          2.1          8           1
 Y tyrosine            1.3          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SLC2A4 regulator 
ZNF704                0.297   zinc finger protein 704 
ZNF395                0.196   zinc finger protein 395 
FLJ22184              0.045   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.035   PREDICTED: hypothetical protein FLJ22184 
SALL3                 0.033   sal-like 3 
PELP1                 0.032   proline, glutamic acid and leucine rich protein 1 [...
TAF4                  0.031   TBP-associated factor 4 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
SYNJ1                 0.030   synaptojanin 1 isoform c 
SRCAP                 0.028   Snf2-related CBP activator protein 
KDM6B                 0.028   lysine (K)-specific demethylase 6B 
MYPOP                 0.028   Myb protein P42POP 
SYNJ1                 0.027   synaptojanin 1 isoform a 
SYNJ1                 0.027   synaptojanin 1 isoform b 
LOC100133756          0.027   PREDICTED: hypothetical protein, partial 
MAPK7                 0.027   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.027   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.027   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.027   mitogen-activated protein kinase 7 isoform 2 
PPRC1                 0.027   peroxisome proliferator-activated receptor gamma, co...
BAI1                  0.027   brain-specific angiogenesis inhibitor 1 precursor [...
WIPF3                 0.026   WAS/WASL interacting protein family, member 3 [Homo...
KIAA0754              0.026   hypothetical protein LOC643314 
TBKBP1                0.024   TBK1 binding protein 1 
ZXDB                  0.024   zinc finger, X-linked, duplicated B 
SYNJ1                 0.024   synaptojanin 1 isoform d 
ZFHX4                 0.024   zinc finger homeodomain 4 
TCF7L2                0.024   transcription factor 7-like 2 isoform 1 
MLL2                  0.023   myeloid/lymphoid or mixed-lineage leukemia 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press