LRPPRC 25641

Name: LRPPRC	Sequence: fasta or formatted (1394aa)		NCBI GI: 31621305
Description: leucine-rich PPR motif-containing protein		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 112 2 C cysteine 1.5 21 2 D aspartate 5.2 72 2 E glutamate 8.5 118 2 F phenylalanine 3.8 53 2 G glycine 4.5 63 2 H histidine 1.8 25 1 I isoleucine 5.6 78 2 K lysine 7.3 102 2 L leucine 13.6 189 4 M methionine 2.3 32 1 N asparagine 4.7 65 3 P proline 3.5 49 2 Q glutamine 4.4 62 3 R arginine 4.8 67 2 S serine 5.9 82 3 T threonine 4.5 63 2 V valine 6.0 84 2 W tryptophan 0.6 9 1 Y tyrosine 3.4 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich PPR motif-containing protein PTCD1 0.007 pentatricopeptide repeat domain 1 MYO18A 0.006 myosin 18A isoform b CCDC88A 0.006 coiled-coil domain containing 88A isoform 1 AKAP9 0.006 A-kinase anchor protein 9 isoform 2 AKAP9 0.006 A-kinase anchor protein 9 isoform 3 MYO18A 0.005 myosin 18A isoform a TTC21B 0.005 tetratricopeptide repeat domain 21B CCDC88A 0.005 coiled-coil domain containing 88A isoform 2 TRIP11 0.005 thyroid hormone receptor interactor 11 CENPE 0.005 centromere protein E CCDC89 0.004 coiled-coil domain containing 89 TTC26 0.003 tetratricopeptide repeat domain 26 isoform 3 PMFBP1 0.003 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.003 polyamine modulated factor 1 binding protein 1 isof... BICD1 0.003 bicaudal D homolog 1 isoform 2 BICD1 0.003 bicaudal D homolog 1 isoform 1 PTCD2 0.003 pentatricopeptide repeat domain 2 BICD2 0.003 bicaudal D homolog 2 isoform 1 BICD2 0.003 bicaudal D homolog 2 isoform 2 CCDC147 0.003 coiled-coil domain containing 147 KIAA1524 0.003 p90 autoantigen SYNE2 0.003 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.003 spectrin repeat containing, nuclear envelope 2 isof... DSCR6 0.003 Down syndrome critical region protein 6 OGT 0.003 O-linked GlcNAc transferase isoform 2 OGT 0.003 O-linked GlcNAc transferase isoform 1 TMF1 0.003 TATA element modulatory factor 1 SKIL 0.003 SKI-like isoform 3 SKIL 0.003 SKI-like isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.