CCDC89 15615

Name: CCDC89	Sequence: fasta or formatted (374aa)		NCBI GI: 22749429
Description: coiled-coil domain containing 89		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 30 2 C cysteine 1.9 7 1 D aspartate 2.9 11 1 E glutamate 17.6 66 3 F phenylalanine 1.6 6 1 G glycine 1.9 7 1 H histidine 1.9 7 1 I isoleucine 2.7 10 1 K lysine 8.6 32 2 L leucine 15.2 57 2 M methionine 2.1 8 2 N asparagine 3.5 13 2 P proline 1.6 6 3 Q glutamine 9.9 37 2 R arginine 8.3 31 2 S serine 5.6 21 2 T threonine 3.5 13 1 V valine 2.4 9 1 W tryptophan 0.0 0 0 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 89 TCHH 0.082 trichohyalin LOC283767 0.075 golgi autoantigen, golgin subfamily a-like DCTN1 0.072 dynactin 1 isoform 4 DCTN1 0.072 dynactin 1 isoform 3 DCTN1 0.072 dynactin 1 isoform 2 DCTN1 0.072 dynactin 1 isoform 1 LOC283685 0.071 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC440243 0.071 PREDICTED: Putative golgin subfamily A member 6-lik... FAM184A 0.069 hypothetical protein LOC79632 isoform 2 FAM184A 0.069 hypothetical protein LOC79632 isoform 1 FYCO1 0.068 FYVE and coiled-coil domain containing 1 MYH9 0.068 myosin, heavy polypeptide 9, non-muscle MYH11 0.068 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.068 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.068 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.068 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC283685 0.068 PREDICTED: golgi autoantigen, golgin subfamily a-li... AKAP9 0.068 A-kinase anchor protein 9 isoform 3 C6orf174 0.067 hypothetical protein LOC387104 CIT 0.067 citron AKAP9 0.067 A-kinase anchor protein 9 isoform 2 LOC645202 0.065 PREDICTED: hypothetical protein LOC645202 TPR 0.065 nuclear pore complex-associated protein TPR GOLGB1 0.065 golgi autoantigen, golgin subfamily b, macrogolgin ... GCC2 0.064 GRIP and coiled-coil domain-containing 2 LOC727832 0.062 golgi autoantigen, golgin subfamily a-like MYH10 0.062 myosin, heavy polypeptide 10, non-muscle CENPE 0.062 centromere protein E PLEC1 0.062 plectin 1 isoform 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.