TTC21B 1677

Name: TTC21B	Sequence: fasta or formatted (1316aa)		NCBI GI: 116089292
Description: tetratricopeptide repeat domain 21B		Referenced in: Additional Structural Proteins Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 126 2 C cysteine 2.1 27 2 D aspartate 5.2 69 2 E glutamate 8.0 105 2 F phenylalanine 3.0 39 2 G glycine 4.0 53 2 H histidine 2.5 33 2 I isoleucine 5.1 67 2 K lysine 7.5 99 2 L leucine 12.9 170 3 M methionine 3.3 43 3 N asparagine 4.1 54 2 P proline 3.0 39 1 Q glutamine 6.5 85 2 R arginine 5.1 67 2 S serine 4.6 61 1 T threonine 4.0 52 1 V valine 4.3 56 2 W tryptophan 0.8 10 1 Y tyrosine 4.6 61 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetratricopeptide repeat domain 21B TTC21A 0.520 tetratricopeptide repeat domain 21A isoform 1 [Homo... TTC21A 0.518 tetratricopeptide repeat domain 21A isoform 2 [Homo... TMTC1 0.012 transmembrane and tetratricopeptide repeat containin... CTR9 0.012 SH2 domain binding protein 1 BBS4 0.009 Bardet-Biedl syndrome 4 NPHP3 0.008 nephrocystin 3 ANAPC7 0.008 anaphase-promoting complex subunit 7 isoform b [Hom... ANAPC7 0.008 anaphase-promoting complex subunit 7 isoform a [Hom... TTC35 0.007 tetratricopeptide repeat domain 35 DNAJC3 0.007 DnaJ (Hsp40) homolog, subfamily C, member 3 SRP72 0.007 signal recognition particle 72kDa EEA1 0.006 early endosome antigen 1, 162kD TTC37 0.006 tetratricopeptide repeat domain 37 CDC27 0.006 cell division cycle protein 27 isoform 1 CDC27 0.006 cell division cycle protein 27 isoform 2 RANBP2 0.006 RAN binding protein 2 RGPD1 0.006 RANBP2-like and GRIP domain containing 1 TTC12 0.006 tetratricopeptide repeat domain 12 STIP1 0.005 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... LRPPRC 0.005 leucine-rich PPR motif-containing protein CDC23 0.005 cell division cycle protein 23 IFT88 0.005 intraflagellar transport 88 homolog isoform 1 IFT88 0.005 intraflagellar transport 88 homolog isoform 2 RGPD3 0.005 RANBP2-like and GRIP domain containing 3 RGPD4 0.005 RANBP2-like and GRIP domain containing 4 OGT 0.005 O-linked GlcNAc transferase isoform 2 OGT 0.005 O-linked GlcNAc transferase isoform 1 USP9Y 0.005 ubiquitin specific protease 9, Y-linked GPSM2 0.005 LGN protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.