Guide to the Human Genome
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Name: TTC26 Sequence: fasta or formatted (523aa) NCBI GI: 222136607
Description:

tetratricopeptide repeat domain 26 isoform 3

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [487aa] tetratricopeptide repeat domain 26 isoform 2
alt prot [554aa] tetratricopeptide repeat domain 26 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         43           2
 C cysteine            1.9         10           1
 D aspartate           4.8         25           2
 E glutamate           7.6         40           2
 F phenylalanine       4.8         25           2
 G glycine             4.8         25           2
 H histidine           1.9         10           1
 I isoleucine          5.2         27           2
 K lysine              7.3         38           3
 L leucine            11.9         62           2
 M methionine          3.1         16           2
 N asparagine          5.4         28           1
 P proline             2.5         13           2
 Q glutamine           5.0         26           2
 R arginine            5.2         27           1
 S serine              5.7         30           3
 T threonine           3.1         16           2
 V valine              5.0         26           2
 W tryptophan          1.0          5           1
 Y tyrosine            5.9         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 26 isoform 3 
TTC26                 0.984   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.824   tetratricopeptide repeat domain 26 isoform 2 
LRPPRC                0.009   leucine-rich PPR motif-containing protein 
ID1                   0.008   inhibitor of DNA binding 1 isoform a 
ID1                   0.008   inhibitor of DNA binding 1 isoform b 
BBS4                  0.008   Bardet-Biedl syndrome 4 
TELO2                 0.007   TEL2, telomere maintenance 2, homolog 
TTC7B                 0.007   tetratricopeptide repeat domain 7B 
STIP1                 0.007   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
MRC1                  0.007   mannose receptor C type 1 precursor 
MNS1                  0.007   meiosis-specific nuclear structural 1 
MRC1L1                0.007   mannose receptor, C type 1-like 1 
TTC21B                0.007   tetratricopeptide repeat domain 21B 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform B 
SPAG1                 0.005   sperm associated antigen 1 
SPAG1                 0.005   sperm associated antigen 1 
XPNPEP3               0.005   X-prolyl aminopeptidase (aminopeptidase P) 3, putati...
GPAM                  0.005   mitochondrial glycerol 3-phosphate acyltransferase ...
TTC8                  0.005   tetratricopeptide repeat domain 8 isoform C 
TMTC2                 0.005   transmembrane and tetratricopeptide repeat containin...
PSMD3                 0.005   proteasome 26S non-ATPase subunit 3 
PRPF4B                0.004   serine/threonine-protein kinase PRP4K 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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