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Search of human proteins with 31377607
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377607 mitochondrial fission factor [Homo sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377607 mitochondrial fission factor [Homo sapiens] 674 0.0
gi|14861838 fetal and adult testis expressed transcript protein ... 44 2e-04
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 35 0.13
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 35 0.13
gi|4557847 gamma sarcoglycan [Homo sapiens] 34 0.17
gi|50980301 myosin phosphatase-Rho interacting protein isoform 2... 34 0.22
gi|50980307 myosin phosphatase-Rho interacting protein isoform 1... 34 0.22
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 33 0.37
gi|24497536 homeobox C13 [Homo sapiens] 33 0.37
gi|193788653 hypothetical protein LOC100131897 [Homo sapiens] 32 0.82
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens] 32 1.1
gi|188536004 zinc finger protein 469 [Homo sapiens] 30 2.4
gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens] 30 2.4
gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens] 30 2.4
gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens] 30 2.4
gi|191250773 spire homolog 1 isoform a [Homo sapiens] 30 2.4
gi|112363080 microtubule associated serine/threonine kinase 2 [H... 30 3.1
gi|67089149 promyelocytic leukemia protein isoform 1 [Homo sapiens] 30 4.1
gi|119943102 CREB binding protein isoform b [Homo sapiens] 30 4.1
gi|119943104 CREB binding protein isoform a [Homo sapiens] 30 4.1
gi|110611228 utrophin [Homo sapiens] 30 4.1
gi|148833504 interleukin 16 isoform 2 [Homo sapiens] 29 5.3
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 29 5.3
gi|140561027 CASK-interacting protein CIP98 isoform 2 [Homo sapi... 29 7.0
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 29 7.0
gi|158303333 synaptopodin isoform B [Homo sapiens] 29 7.0
gi|40353727 synaptopodin isoform A [Homo sapiens] 29 7.0
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 29 7.0
gi|7706687 Enah/Vasp-like [Homo sapiens] 29 7.0
gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo sapi... 29 7.0
>gi|31377607 mitochondrial fission factor [Homo sapiens]
Length = 342
Score = 674 bits (1739), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MSKGTSSDTSLGRVSRAAFPSPTAAEMAEISRIQYEMEYTEGISQRMRVPEKLKVAPPNA 60
MSKGTSSDTSLGRVSRAAFPSPTAAEMAEISRIQYEMEYTEGISQRMRVPEKLKVAPPNA
Sbjct: 1 MSKGTSSDTSLGRVSRAAFPSPTAAEMAEISRIQYEMEYTEGISQRMRVPEKLKVAPPNA 60
Query: 61 DLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPRVL 120
DLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPRVL
Sbjct: 61 DLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPRVL 120
Query: 121 TLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSA 180
TLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSA
Sbjct: 121 TLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSA 180
Query: 181 PRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQ 240
PRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQ
Sbjct: 181 PRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQ 240
Query: 241 QILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDDLTVVDAASLRRQI 300
QILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDDLTVVDAASLRRQI
Sbjct: 241 QILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDDLTVVDAASLRRQI 300
Query: 301 IKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSWLWFRR 342
IKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSWLWFRR
Sbjct: 301 IKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSWLWFRR 342
>gi|14861838 fetal and adult testis expressed transcript protein
[Homo sapiens]
Length = 183
Score = 44.3 bits (103), Expect = 2e-04
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 278 DTTIEGTSDDLTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSW 337
D + + ++ V++ +RRQ+ +NRRL+ LEE+ RE ++ ++ V+ + N W
Sbjct: 119 DAVAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLW 178
Query: 338 LWFRR 342
LW +
Sbjct: 179 LWMNQ 183
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/189 (24%), Positives = 71/189 (37%), Gaps = 38/189 (20%)
Query: 116 PPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWH 175
PP L S L+FL L T Q EE+ A R KR R + E
Sbjct: 678 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE----------------- 720
Query: 176 RSDSAPRNKISRFQAPISAPEYTVTPSPQQA---RVCPPHMLPEDGANLSSARGILSL-- 230
RS S P + R TPSP+ A R P M + N + L++
Sbjct: 721 RSPSPPTIQSKR-----------QTPSPRLALSTRYSPDEM--NNSPNFEEKKKFLTIFN 767
Query: 231 ---IQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDD 287
I + R+ ++++++L ++ L A + +N D+ +S T +
Sbjct: 768 LTHISAEKRKDKERLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVE 827
Query: 288 LTVVDAASL 296
V AASL
Sbjct: 828 KPVGVAASL 836
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/189 (24%), Positives = 71/189 (37%), Gaps = 38/189 (20%)
Query: 116 PPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWH 175
PP L S L+FL L T Q EE+ A R KR R + E
Sbjct: 782 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE----------------- 824
Query: 176 RSDSAPRNKISRFQAPISAPEYTVTPSPQQA---RVCPPHMLPEDGANLSSARGILSL-- 230
RS S P + R TPSP+ A R P M + N + L++
Sbjct: 825 RSPSPPTIQSKR-----------QTPSPRLALSTRYSPDEM--NNSPNFEEKKKFLTIFN 871
Query: 231 ---IQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDD 287
I + R+ ++++++L ++ L A + +N D+ +S T +
Sbjct: 872 LTHISAEKRKDKERLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVE 931
Query: 288 LTVVDAASL 296
V AASL
Sbjct: 932 KPVGVAASL 940
>gi|4557847 gamma sarcoglycan [Homo sapiens]
Length = 291
Score = 34.3 bits (77), Expect = 0.17
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 49 VPEKLKVAPPNADLE-QGFQEGVPNASVIMQVPERIVVAGNN-------EDVSFSRPADL 100
V +LKV P +++ Q FQ + + V E+ VV G + E F +
Sbjct: 122 VTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTDKLRVTGPEGALFEHSVET 181
Query: 101 DLIQSTPFKPLALKTPPRVLTL 122
L+++ PF+ L L++P R L++
Sbjct: 182 PLVRADPFQDLRLESPTRSLSM 203
>gi|50980301 myosin phosphatase-Rho interacting protein isoform 2
[Homo sapiens]
Length = 1025
Score = 33.9 bits (76), Expect = 0.22
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 196 EYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQQILDVLDENR 250
E T +Q + P H+ EDG + S + SL++ ++ ++ D+L++NR
Sbjct: 644 ETTPLREEKQVPIAPVHLSSEDGGDRLSTHELTSLLEKELEQSQKEASDLLEQNR 698
>gi|50980307 myosin phosphatase-Rho interacting protein isoform 1
[Homo sapiens]
Length = 1038
Score = 33.9 bits (76), Expect = 0.22
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 196 EYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQQILDVLDENR 250
E T +Q + P H+ EDG + S + SL++ ++ ++ D+L++NR
Sbjct: 644 ETTPLREEKQVPIAPVHLSSEDGGDRLSTHELTSLLEKELEQSQKEASDLLEQNR 698
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.1 bits (74), Expect = 0.37
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 22/204 (10%)
Query: 20 PSPTAAEMAEISR--IQYEMEYTEGISQRMRV---PEKLKVAPPNADLEQGFQEGVPNAS 74
P P E + + +Q E + +++ M + PE+ ++PP E+ P AS
Sbjct: 409 PGPLQCEAKPLGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPP---EESPTSPPPEAS 465
Query: 75 VIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPRVLTLSERPLDFLDLER 134
+ PE + + E + SRP + + S P + L PP S PL+ L
Sbjct: 466 RLSPPPEELPASPLPEALHLSRPLEESPL-SPPPEESPLSPPPESSPFS--PLEESPLSP 522
Query: 135 PPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKISRF-----Q 189
P +P + + E S ++ + L ++P + SR +
Sbjct: 523 PEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEEL----PTSPPPEASRLSPPPEE 578
Query: 190 APISAP--EYTVTPSPQQARVCPP 211
+P+S P E ++P P+ +R+ PP
Sbjct: 579 SPMSPPPEESPMSPPPEASRLFPP 602
>gi|24497536 homeobox C13 [Homo sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.37
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 175 HRSDSAPRNKISRFQAPISAPE---YTVTPSPQQARVCPPHMLPEDGANLSSARG 226
H D P + R AP+ AP+ YT P+P+ AR C P P ++ + G
Sbjct: 68 HCRDLLPHPVLGRPPAPLGAPQGAVYTDIPAPEAARQCAPPPAPPTSSSATLGYG 122
>gi|193788653 hypothetical protein LOC100131897 [Homo sapiens]
Length = 535
Score = 32.0 bits (71), Expect = 0.82
Identities = 61/280 (21%), Positives = 105/280 (37%), Gaps = 29/280 (10%)
Query: 48 RVPEKLKVAPPNADLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTP 107
RVP+ P + LE G + A+ +QVP+ I + + E + D S
Sbjct: 173 RVPKVQSNGPVSICLEAGTWRSLEKATAAIQVPDDIYHSPSWEARESALSPDRSAEVSNS 232
Query: 108 FKPLALKTP---PRVLTL-SERPLDFLDLERPPT-TPQNEEIRAVGRLKRERSMSENAVR 162
PL P RV L SE+ L+ + TP EE++ L ++ S ++
Sbjct: 233 IHPLDDTRPGDGRRVTPLDSEKSTSCLNATSVASHTPGTEELKPELLLPKDNSDDKDLGS 292
Query: 163 QNGQLVRNDSLWHRSDSAPRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLS 222
+ Q S S+PR S Q S P + P +A CP S
Sbjct: 293 LSSQ-----SKETCVPSSPRTHSSPSQGSHSQPAH-----PGRASDCP-----------S 331
Query: 223 SARGILSLIQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIE 282
S+ +L+ T A + ++ + + P +++ +S +T ++
Sbjct: 332 SSNNHQNLVSLKTNSASKSAPGCQEQTANNPTESDTLEFPNCPGSNHLPSSLSRSETKLQ 391
Query: 283 GTSDDLTVVDAASLRRQIIKLNRRLQLLEE---ENKERAK 319
+ + R ++ L RLQ +EE N+E+ K
Sbjct: 392 SNREISDINQIHLARGELCDLQGRLQSVEESLHSNQEKIK 431
>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
Length = 1958
Score = 31.6 bits (70), Expect = 1.1
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 97 PADLDLIQSTP-FKPLALKTPPRVLTLSERPLDFL---DLERPPT--TPQNEEIRAVGRL 150
P DL +QS F+ + PR ++ PL + L+ P T T + ++ +
Sbjct: 587 PPDLKTLQSNRNFQTTCGMSLPRGISQDRSPLVKVRSNSLKAPSTHVTKPSFSQKSFVSI 646
Query: 151 KRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKISRFQAPISAPEYTVTPSPQQARVCP 210
K +R + N + QN L N W R+DSAP ++ ++P S + P+PQ +
Sbjct: 647 KDQRPV--NHLHQNSLL--NQQTWVRTDSAPDQQVETGKSP-SLSGASAKPAPQSSENAG 701
Query: 211 PHMLPEDGANLSSARGILSLIQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNP 265
L +S LSL ++ T ++ D LD +LR + P
Sbjct: 702 TSDLE---LPVSQRNQDLSLQEAETEQS-----DTLDNKEAVILREKPPSGRQTP 748
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 30.4 bits (67), Expect = 2.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 187 RFQAPISAPEYTVTPSPQQARVCP--PHMLPEDG---ANLSSARGIL 228
RF P + SPQ+ +CP P + PE G A+L A G+L
Sbjct: 3317 RFPKPFKLQRHLAVHSPQRVYLCPRCPRVYPEHGELLAHLGGAHGLL 3363
>gi|19743838 TAR RNA binding protein 2 isoform b [Homo sapiens]
Length = 345
Score = 30.4 bits (67), Expect = 2.4
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 90 EDVSFSRPADLDLIQSTP-FKPLALKTP-PRVLTLSERPLDFLDLERPPTTPQNEEIRAV 147
ED S P D L + P F A TP P V+ P++ +PP +PQ E V
Sbjct: 85 EDSSSFSPLDSSLPEDIPVFTAAAAATPVPSVVLTRSPPMEL----QPPVSPQQSECNPV 140
Query: 148 GRLK 151
G L+
Sbjct: 141 GALQ 144
>gi|19743840 TAR RNA binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 30.4 bits (67), Expect = 2.4
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 90 EDVSFSRPADLDLIQSTP-FKPLALKTP-PRVLTLSERPLDFLDLERPPTTPQNEEIRAV 147
ED S P D L + P F A TP P V+ P++ +PP +PQ E V
Sbjct: 106 EDSSSFSPLDSSLPEDIPVFTAAAAATPVPSVVLTRSPPMEL----QPPVSPQQSECNPV 161
Query: 148 GRLK 151
G L+
Sbjct: 162 GALQ 165
>gi|85068512 TAR RNA binding protein 2 isoform b [Homo sapiens]
Length = 345
Score = 30.4 bits (67), Expect = 2.4
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 90 EDVSFSRPADLDLIQSTP-FKPLALKTP-PRVLTLSERPLDFLDLERPPTTPQNEEIRAV 147
ED S P D L + P F A TP P V+ P++ +PP +PQ E V
Sbjct: 85 EDSSSFSPLDSSLPEDIPVFTAAAAATPVPSVVLTRSPPMEL----QPPVSPQQSECNPV 140
Query: 148 GRLK 151
G L+
Sbjct: 141 GALQ 144
>gi|191250773 spire homolog 1 isoform a [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 2.4
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 100 LDLIQSTP-FKPLALK----TPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRER 154
LD I+S P P++ + TPPR +L ER L+ + ER EEIR R
Sbjct: 342 LDFIRSRPPLNPVSARKLKPTPPRPRSLHERILEEIKAERKLRPVSPEEIRRSRLAMRPL 401
Query: 155 SMS 157
SMS
Sbjct: 402 SMS 404
>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
sapiens]
Length = 1798
Score = 30.0 bits (66), Expect = 3.1
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 50 PEKLKVAPP-NADLEQGFQEGVPNASVIMQVPER----IVVAGNNEDVSFSRPADLDLIQ 104
P KL ++PP L + P + ++ +V +A + + ++ SR LDL
Sbjct: 1375 PTKLHLSPPLGRQLSRPKSAEPPRSPLLKRVQSAEKLAAALAASEKKLATSRKHSLDL-- 1432
Query: 105 STPFKPLALKTPPRVLTLSERPLDFLD----LERPPTTP-----QNEEIRAVGRLKRERS 155
P L + PPR ++ PL+ + L P Q RA+G L+++R+
Sbjct: 1433 --PHSELKKELPPREVS----PLEVVGARSVLSGKGALPGKGVLQPAPSRALGTLRQDRA 1486
Query: 156 MSENAVRQNGQLVRNDSLWHRSDSAPRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLP 215
++++ + DS ++ P N A E ++ P P+ ++ P
Sbjct: 1487 ERRESLQKQEAIREVDSSEDDTEEGPENS-------QGAQELSLAPHPEVSQSVAPKGAG 1539
Query: 216 EDG 218
E G
Sbjct: 1540 ESG 1542
>gi|67089149 promyelocytic leukemia protein isoform 1 [Homo sapiens]
Length = 882
Score = 29.6 bits (65), Expect = 4.1
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 34/166 (20%)
Query: 23 TAAEMAEISRIQ-----YEMEYTEGISQRMR--VPEKLK------VAPPNADLEQ----- 64
T A+ + S+ Q +ME EG R+ PE+ + V+PP+ D
Sbjct: 472 TTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSP 531
Query: 65 --GFQEGVPNASVIM----QVPERIVVAGNNEDVSFSRPADLDLIQSTP-FKPLALKTPP 117
G + +PN++ + + ER+VV ++ED + +L S+ L L+ P
Sbjct: 532 VIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPS 591
Query: 118 RVLTLSE---------RPLDFLDLERPPTTPQNEEIRAVGRLKRER 154
+ L E RPL F DL+ T + ++ AV R + R
Sbjct: 592 TLRVLDENLADPQAEDRPLVFFDLKIDNETQKISQLAAVNRESKFR 637
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 29.6 bits (65), Expect = 4.1
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 110 PLALKTPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQN----- 164
P +T P + +P + PP P + A +++RE ++ R N
Sbjct: 1884 PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSM 1943
Query: 165 -----GQLVRNDSLWHRSDSAPR-NKISRFQAPISAP-EYTVTPSPQ------------- 204
G + S + PR N++S P P ++ P PQ
Sbjct: 1944 PPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVIS 2003
Query: 205 ---QARVCPPHM---LPEDGANLSSARGILSLIQS-STRRAYQQILDVLDEN 249
QA V P M P + S+ + +L ++S S+ + QQ+L++L N
Sbjct: 2004 MQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSN 2055
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 29.6 bits (65), Expect = 4.1
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 110 PLALKTPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQN----- 164
P +T P + +P + PP P + A +++RE ++ R N
Sbjct: 1922 PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSM 1981
Query: 165 -----GQLVRNDSLWHRSDSAPR-NKISRFQAPISAP-EYTVTPSPQ------------- 204
G + S + PR N++S P P ++ P PQ
Sbjct: 1982 PPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVIS 2041
Query: 205 ---QARVCPPHM---LPEDGANLSSARGILSLIQS-STRRAYQQILDVLDEN 249
QA V P M P + S+ + +L ++S S+ + QQ+L++L N
Sbjct: 2042 MQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSN 2093
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 29.6 bits (65), Expect = 4.1
Identities = 47/211 (22%), Positives = 81/211 (38%), Gaps = 39/211 (18%)
Query: 113 LKTPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDS 172
L+TP ++++ D P +PQ R+++ + R NG + + S
Sbjct: 3163 LETPITLISMWPEHYD------PSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSS 3216
Query: 173 LWHRSDSAPRNKISRF------QAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARG 226
S I ++ ++P+S P+ SP Q E+ L
Sbjct: 3217 STTGSVEDEHALIQQYCQTLGGESPVSQPQ-----SPAQILKSVER---EERGELERIIA 3268
Query: 227 ILSLIQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSD 286
L Q + + Y+Q+ D RR + G + +PHH TS+
Sbjct: 3269 DLEEEQRNLQVEYEQLKD--QHLRRGLPVGSPPESIISPHH----------------TSE 3310
Query: 287 DLTVVDAASLRRQII-KLNRRLQLLEEENKE 316
D ++ A L RQ +L R+Q+LE+ NK+
Sbjct: 3311 DSELIAEAKLLRQHKGRLEARMQILEDHNKQ 3341
>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
Length = 1332
Score = 29.3 bits (64), Expect = 5.3
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 56 APPNADLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKT 115
APP+ ++ ++S + P +G+ E S +D+D+ +P PLA +
Sbjct: 497 APPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPS----SDVDISTHSPSLPLARE- 551
Query: 116 PPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQ--NGQLVRNDSL 173
P VL+++ L + P P++ + RLK+ E VR+ + +
Sbjct: 552 -PVVLSIASSRLP----QESPPLPESRDSHPPLRLKKS---FEILVRKPMSSKPKPPPRK 603
Query: 174 WHRSDSAPRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPED 217
+ +SDS P+ + + + +T Q+AR P +LP++
Sbjct: 604 YFKSDSDPQKSLEERENSSCSSGHTPPTCGQEARELLPLLLPQE 647
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 29.3 bits (64), Expect = 5.3
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 41 EGISQRMRVPEKLKVAPPNADLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADL 100
EG+ + P++ K+ P L +EG P+ S P+ + G+ +S PA
Sbjct: 421 EGLQVVLGTPDRGKLRNPAGGLSVSRKEGSPSRS-----PQGLRNRGDGH-ISQQVPAGA 474
Query: 101 DLIQSTPFKPLALKTPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRER 154
+ + P KPL P +L L R + +EE G LKR R
Sbjct: 475 NGLAGHPLKPLPWPVPKLRRSLRRSSL----AGRAKLSSSDEEYLDEGLLKRSR 524
>gi|140561027 CASK-interacting protein CIP98 isoform 2 [Homo
sapiens]
Length = 524
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 130 LDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKISRFQ 189
+++ RP + P E+RA+ + + ++S + +GQ + DS + +
Sbjct: 341 VEVHRPDSEPDVNEVRALPQTRTASTLSH--LSDSGQTLSEDS-----------GVDAGE 387
Query: 190 APISAP---EYTVTPSPQQARVCPPHMLPEDGAN 220
A SAP +V+ + ++ P + P DGAN
Sbjct: 388 AEASAPGRGRQSVSTKSRSSKELPRNERPTDGAN 421
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 130 LDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKISRFQ 189
+++ RP + P E+RA+ + + ++S + +GQ + DS + +
Sbjct: 724 VEVHRPDSEPDVNEVRALPQTRTASTLSH--LSDSGQTLSEDS-----------GVDAGE 770
Query: 190 APISAP---EYTVTPSPQQARVCPPHMLPEDGAN 220
A SAP +V+ + ++ P + P DGAN
Sbjct: 771 AEASAPGRGRQSVSTKSRSSKELPRNERPTDGAN 804
>gi|158303333 synaptopodin isoform B [Homo sapiens]
Length = 685
Score = 28.9 bits (63), Expect = 7.0
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 129 FLDLERPPTTPQNEE---IRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKI 185
F +E+P TP + ++ +R+R E V + + ++ + + APR++
Sbjct: 381 FTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRA 440
Query: 186 SRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARG 226
S A PE+ + + P P+ NLS A G
Sbjct: 441 SPAAAEEVVPEWASCLKSPRIQAKPK---PKPNQNLSEASG 478
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 28.9 bits (63), Expect = 7.0
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 129 FLDLERPPTTPQNEE---IRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKI 185
F +E+P TP + ++ +R+R E V + + ++ + + APR++
Sbjct: 381 FTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRA 440
Query: 186 SRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARG 226
S A PE+ + + P P+ NLS A G
Sbjct: 441 SPAAAEEVVPEWASCLKSPRIQAKPK---PKPNQNLSEASG 478
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 191 PISAPEYTVTPSPQQARVCPPHM-LPEDGANLSSARGILSLIQSSTRRAYQQILDVLDEN 249
P +AP ++ P PQQ + PP P L SA SS I D+L ++
Sbjct: 97 PAAAPTQSLQPLPQQQQPLPPQQPPPPPPQQLGSAASAPRTSTSSF-----LIKDILGDS 151
Query: 250 RRPVLRGGSAAATSNPHH 267
+ + + S+PHH
Sbjct: 152 KPLAACAPYSTSVSSPHH 169
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 28.9 bits (63), Expect = 7.0
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 16/105 (15%)
Query: 153 ERSMSENAVRQNGQLVRNDSLWHRSDSA-----PRNKISRFQAPISA------PEYTVTP 201
E + V + Q R +SL R+ + P + S AP+S P V P
Sbjct: 135 EMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPP 194
Query: 202 SPQQARVCPPHMLPEDGA-----NLSSARGILSLIQSSTRRAYQQ 241
P A PP LP GA + SS G+ + I + R Q+
Sbjct: 195 PPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQR 239
>gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo
sapiens]
Length = 169
Score = 28.9 bits (63), Expect = 7.0
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 204 QQARVCPPHML-----PEDGANLSSARGILSLIQSSTRRAYQQILDVLDENRRPVLRGGS 258
+ +CPP +L E ANL+ I + + + Q +L R PV R
Sbjct: 14 ESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSES--QLVLRRDSSQRLPVARPRR 71
Query: 259 AAATSNPHHDNVRYGISNIDTTIEGTSDDLTVVDAASLRRQIIKLNRR---LQLLEEENK 315
+ + N H + SN + I ++ L + ++ + + K R LQLL ++ +
Sbjct: 72 SRGSENSHSSQSFHLASNKNRDI--FAEALKIQESEEKVKYLQKAKTREEILQLLRKQRE 129
Query: 316 ERAKREMV 323
ER +E++
Sbjct: 130 ERISKELI 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,264,242
Number of Sequences: 37866
Number of extensions: 616414
Number of successful extensions: 2350
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2329
Number of HSP's gapped (non-prelim): 52
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.