TARBP2 11486

Name: TARBP2	Sequence: fasta or formatted (345aa)		NCBI GI: 19743838
Description: TAR RNA binding protein 2 isoform b		Referenced in: RNases and RNA Stability
Other entries for this name: alt prot [366aa] TAR RNA binding protein 2 isoform a alt mRNA [345aa] TAR RNA binding protein 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 33 5 C cysteine 2.9 10 2 D aspartate 3.8 13 3 E glutamate 7.2 25 2 F phenylalanine 2.3 8 1 G glycine 8.1 28 2 H histidine 2.3 8 1 I isoleucine 2.6 9 1 K lysine 5.2 18 2 L leucine 11.0 38 2 M methionine 1.7 6 1 N asparagine 2.0 7 1 P proline 7.0 24 2 Q glutamine 4.1 14 2 R arginine 5.8 20 2 S serine 9.6 33 3 T threonine 6.1 21 2 V valine 6.7 23 2 W tryptophan 0.6 2 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TAR RNA binding protein 2 isoform b TARBP2 1.000 TAR RNA binding protein 2 isoform a TARBP2 1.000 TAR RNA binding protein 2 isoform b PRKRA 0.351 protein kinase, interferon-inducible double strande... PRKRA 0.351 protein kinase, interferon-inducible double strande... PRKRA 0.351 protein kinase, interferon-inducible double stranded ... STAU2 0.081 staufen homolog 2 STAU1 0.081 staufen isoform a STAU1 0.081 staufen isoform b STAU1 0.081 staufen isoform a STAU1 0.081 staufen isoform a STAU1 0.078 staufen isoform c ADARB1 0.072 RNA-specific adenosine deaminase B1 isoform 7 [Homo... ADARB1 0.072 RNA-specific adenosine deaminase B1 isoform 3 ADARB1 0.072 RNA-specific adenosine deaminase B1 isoform 2 ADARB1 0.072 RNA-specific adenosine deaminase B1 isoform 1 ADAR 0.065 adenosine deaminase, RNA-specific isoform d ADAR 0.065 adenosine deaminase, RNA-specific isoform b ADAR 0.065 adenosine deaminase, RNA-specific isoform a STRBP 0.053 spermatid perinuclear RNA binding protein ADAR 0.053 adenosine deaminase, RNA-specific isoform c ILF3 0.051 interleukin enhancer binding factor 3 isoform c [Hom... ILF3 0.051 interleukin enhancer binding factor 3 isoform b [Hom... ILF3 0.051 interleukin enhancer binding factor 3 isoform a [Hom... ILF3 0.050 interleukin enhancer binding factor 3 isoform e [Ho... ILF3 0.050 interleukin enhancer binding factor 3 isoform d [Ho... ADARB2 0.038 adenosine deaminase, RNA-specific, B2 SON 0.021 SON DNA-binding protein isoform F DGCR8 0.021 DiGeorge syndrome critical region gene 8 EIF2AK2 0.015 eukaryotic translation initiation factor 2-alpha ki... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.