TARBP2 11487

Name: TARBP2	Sequence: fasta or formatted (366aa)		NCBI GI: 19743840
Description: TAR RNA binding protein 2 isoform a		Referenced in: RNases and RNA Stability
Other entries for this name: alt prot [345aa] TAR RNA binding protein 2 isoform b alt prot [345aa] TAR RNA binding protein 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 33 5 C cysteine 3.0 11 2 D aspartate 3.6 13 3 E glutamate 7.9 29 3 F phenylalanine 2.2 8 1 G glycine 8.7 32 2 H histidine 2.2 8 1 I isoleucine 2.7 10 1 K lysine 4.9 18 2 L leucine 10.7 39 2 M methionine 1.9 7 1 N asparagine 1.9 7 1 P proline 6.8 25 2 Q glutamine 4.4 16 2 R arginine 5.5 20 2 S serine 9.8 36 3 T threonine 6.6 24 3 V valine 6.3 23 2 W tryptophan 0.5 2 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TAR RNA binding protein 2 isoform a TARBP2 0.939 TAR RNA binding protein 2 isoform b TARBP2 0.939 TAR RNA binding protein 2 isoform b PRKRA 0.339 protein kinase, interferon-inducible double strande... PRKRA 0.332 protein kinase, interferon-inducible double stranded ... PRKRA 0.330 protein kinase, interferon-inducible double strande... STAU2 0.076 staufen homolog 2 STAU1 0.076 staufen isoform a STAU1 0.076 staufen isoform b STAU1 0.076 staufen isoform a STAU1 0.076 staufen isoform a STAU1 0.074 staufen isoform c ADARB1 0.068 RNA-specific adenosine deaminase B1 isoform 7 [Homo... ADARB1 0.068 RNA-specific adenosine deaminase B1 isoform 3 ADARB1 0.068 RNA-specific adenosine deaminase B1 isoform 2 ADARB1 0.068 RNA-specific adenosine deaminase B1 isoform 1 ADAR 0.061 adenosine deaminase, RNA-specific isoform d ADAR 0.061 adenosine deaminase, RNA-specific isoform b ADAR 0.061 adenosine deaminase, RNA-specific isoform a STRBP 0.050 spermatid perinuclear RNA binding protein ADAR 0.050 adenosine deaminase, RNA-specific isoform c ILF3 0.048 interleukin enhancer binding factor 3 isoform c [Hom... ILF3 0.048 interleukin enhancer binding factor 3 isoform b [Hom... ILF3 0.048 interleukin enhancer binding factor 3 isoform a [Hom... ILF3 0.047 interleukin enhancer binding factor 3 isoform e [Ho... ILF3 0.047 interleukin enhancer binding factor 3 isoform d [Ho... ADARB2 0.035 adenosine deaminase, RNA-specific, B2 DGCR8 0.020 DiGeorge syndrome critical region gene 8 SON 0.020 SON DNA-binding protein isoform F EIF2AK2 0.014 eukaryotic translation initiation factor 2-alpha ki... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.