C11orf88 5517

Name: C11orf88	Sequence: fasta or formatted (169aa)		NCBI GI: 154240677
Description: hypothetical protein LOC399949 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {196aa} hypothetical protein LOC399949 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 11 1 C cysteine 0.6 1 1 D aspartate 3.6 6 1 E glutamate 13.0 22 2 F phenylalanine 2.4 4 1 G glycine 3.0 5 1 H histidine 1.8 3 1 I isoleucine 3.6 6 1 K lysine 10.7 18 2 L leucine 8.9 15 2 M methionine 1.8 3 1 N asparagine 2.4 4 1 P proline 5.9 10 2 Q glutamine 6.5 11 1 R arginine 7.7 13 2 S serine 13.6 23 2 T threonine 1.8 3 1 V valine 4.1 7 2 W tryptophan 0.6 1 1 Y tyrosine 1.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC399949 isoform 2 C11orf88 0.954 hypothetical protein LOC399949 isoform 1 CEP110 0.056 centrosomal protein 110kDa CPLX2 0.046 complexin 2 CPLX2 0.046 complexin 2 ATXN2 0.046 ataxin 2 TRDN 0.043 triadin BAZ2B 0.043 bromodomain adjacent to zinc finger domain, 2B [Homo... CIT 0.039 citron MNS1 0.039 meiosis-specific nuclear structural 1 TNIK 0.036 TRAF2 and NCK interacting kinase isoform 6 TNIK 0.036 TRAF2 and NCK interacting kinase isoform 5 TNIK 0.036 TRAF2 and NCK interacting kinase isoform 2 TNIK 0.036 TRAF2 and NCK interacting kinase isoform 1 TCHH 0.036 trichohyalin SON 0.033 SON DNA-binding protein isoform F SON 0.033 SON DNA-binding protein isoform B TNIK 0.033 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.033 TRAF2 and NCK interacting kinase isoform 7 TNIK 0.033 TRAF2 and NCK interacting kinase isoform 4 TNIK 0.033 TRAF2 and NCK interacting kinase isoform 3 ANKHD1 0.033 ankyrin repeat and KH domain containing 1 isoform 1 ... ANKHD1-EIF4EBP3 0.033 ANKHD1-EIF4EBP3 protein SFRS4 0.030 splicing factor, arginine/serine-rich 4 PLEC1 0.030 plectin 1 isoform 11 PLEC1 0.030 plectin 1 isoform 10 PLEC1 0.030 plectin 1 isoform 8 PLEC1 0.030 plectin 1 isoform 7 PLEC1 0.030 plectin 1 isoform 6 PLEC1 0.030 plectin 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.