Guide to the Human Genome
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Name: CEND1 Sequence: fasta or formatted (149aa) NCBI GI: 30795225
Description:

cell cycle exit and neuronal differentiation 1

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.8         25           2
 C cysteine            0.7          1           1
 D aspartate           4.0          6           1
 E glutamate           6.0          9           2
 F phenylalanine       1.3          2           1
 G glycine             8.7         13           2
 H histidine           0.7          1           1
 I isoleucine          1.3          2           1
 K lysine             10.7         16           2
 L leucine             6.0          9           2
 M methionine          0.7          1           1
 N asparagine          3.4          5           2
 P proline            15.4         23           2
 Q glutamine           2.0          3           2
 R arginine            2.0          3           1
 S serine              7.4         11           2
 T threonine           6.0          9           2
 V valine              6.0          9           1
 W tryptophan          0.7          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell cycle exit and neuronal differentiation 1 [Homo... 
BASP1                 0.087   brain abundant, membrane attached signal protein 1 [...
FLJ22184              0.087   PREDICTED: hypothetical protein LOC80164 
NACA                  0.083   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.072   PREDICTED: hypothetical protein FLJ22184 
ANKRD43               0.072   ankyrin repeat domain 43 
WNK4                  0.069   WNK lysine deficient protein kinase 4 
SFPQ                  0.069   splicing factor proline/glutamine rich (polypyrimidin...
CASKIN1               0.069   CASK interacting protein 1 
C17orf96              0.069   hypothetical protein LOC100170841 
MAP7D1                0.069   MAP7 domain containing 1 
FLJ22184              0.061   PREDICTED: hypothetical protein FLJ22184 
C11orf61              0.061   hypothetical protein LOC79684 
ASAP2                 0.061   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
FSCB                  0.061   fibrous sheath CABYR binding protein 
DNM1                  0.061   dynamin 1 isoform 2 
DNM1                  0.061   dynamin 1 isoform 1 
FAM71E2               0.058   hypothetical protein LOC284418 
PRG4                  0.058   proteoglycan 4 isoform D 
PRG4                  0.058   proteoglycan 4 isoform C 
PRG4                  0.058   proteoglycan 4 isoform B 
PRG4                  0.058   proteoglycan 4 isoform A 
MUC2                  0.058   mucin 2 precursor 
ARHGEF15              0.054   Rho guanine exchange factor 15 
NEFH                  0.054   neurofilament, heavy polypeptide 200kDa 
BAT2                  0.054   HLA-B associated transcript-2 
MLL                   0.054   myeloid/lymphoid or mixed-lineage leukemia protein [...
MUC7                  0.054   mucin 7, secreted precursor 
AEBP1                 0.054   adipocyte enhancer binding protein 1 precursor [Homo...
MUC7                  0.054   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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