Guide to the Human Genome
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Name: ARHGEF15 Sequence: fasta or formatted (841aa) NCBI GI: 32307166
Description:

Rho guanine exchange factor 15

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         65           2
 C cysteine            2.0         17           2
 D aspartate           3.8         32           1
 E glutamate           6.7         56           3
 F phenylalanine       2.4         20           1
 G glycine             6.2         52           2
 H histidine           2.0         17           2
 I isoleucine          1.7         14           2
 K lysine              2.1         18           1
 L leucine            11.8         99           3
 M methionine          1.0          8           1
 N asparagine          2.1         18           1
 P proline            12.7        107           3
 Q glutamine           5.7         48           2
 R arginine            9.2         77           3
 S serine              9.9         83           3
 T threonine           5.7         48           2
 V valine              5.1         43           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine exchange factor 15 
NGEF                  0.154   neuronal guanine nucleotide exchange factor isoform...
NGEF                  0.154   neuronal guanine nucleotide exchange factor isoform...
ARHGEF5               0.145   rho guanine nucleotide exchange factor 5 
ARHGEF19              0.138   Rho guanine nucleotide exchange factor (GEF) 19 [Hom...
ARHGEF16              0.132   Rho guanine exchange factor 16 
SGEF                  0.129   Src homology 3 domain-containing guanine nucleotide...
FGD1                  0.042   faciogenital dysplasia protein 
ITSN1                 0.035   intersectin 1 isoform ITSN-l 
FGD4                  0.035   FYVE, RhoGEF and PH domain containing 4 
FGD2                  0.035   FYVE, RhoGEF and PH domain containing 2 
ARHGEF11              0.032   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.032   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ITSN2                 0.032   intersectin 2 isoform 3 
ITSN2                 0.032   intersectin 2 isoform 1 
PLEKHG5               0.031   pleckstrin homology domain containing family G membe...
PLEKHG5               0.031   pleckstrin homology domain containing family G memb...
PLEKHG5               0.031   pleckstrin homology domain containing family G memb...
PLEKHG5               0.031   pleckstrin homology domain containing family G memb...
PLEKHG5               0.031   pleckstrin homology domain containing family G memb...
ARHGEF1               0.031   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.031   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF1               0.031   Rho guanine nucleotide exchange factor 1 isoform 2 [...
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein LOC80164 
ARHGEF12              0.027   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
ARHGEF10L             0.024   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.024   Rho guanine nucleotide exchange factor (GEF) 10-like...
PLEKHG2               0.024   common-site lymphoma/leukemia guanine nucleotide ex...
PLEKHG6               0.024   pleckstrin homology domain-containing family G memb...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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