Guide to the Human Genome
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Name: PTH2 Sequence: fasta or formatted (100aa) NCBI GI: 30425368
Description:

parathyroid hormone 2 preproprotein

Referenced in:

Additional Brain Proteins
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0         13           2
 C cysteine            0.0          0           0
 D aspartate           4.0          4           2
 E glutamate           3.0          3           1
 F phenylalanine       1.0          1           1
 G glycine             4.0          4           1
 H histidine           2.0          2           1
 I isoleucine          0.0          0           0
 K lysine              1.0          1           1
 L leucine            21.0         21           9
 M methionine          2.0          2           1
 N asparagine          1.0          1           1
 P proline            10.0         10           2
 Q glutamine           1.0          1           1
 R arginine           15.0         15           2
 S serine              6.0          6           1
 T threonine           3.0          3           1
 V valine              9.0          9           2
 W tryptophan          3.0          3           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   parathyroid hormone 2 preproprotein 
C7orf31               0.040   hypothetical protein LOC136895 
C3orf15               0.023   AAT1-alpha 
C17orf96              0.023   hypothetical protein LOC100170841 
NDST2                 0.017   heparan glucosaminyl N-deacetylase/N-sulfotransferase...
PRDM15                0.017   PR domain containing 15 isoform 1 
LOC728744             0.017   PREDICTED: hypothetical protein 
SYNGAP1               0.017   synaptic Ras GTPase activating protein 1 
JAM2                  0.017   junctional adhesion molecule 2 precursor 
HERC2                 0.011   hect domain and RLD 2 
NXPH4                 0.011   neurexophilin 4 
TOR3A                 0.011   torsin family 3, member A 
ADAM33                0.011   ADAM metallopeptidase domain 33 isoform alpha prepro...
ADAM33                0.011   ADAM metallopeptidase domain 33 isoform beta preprop...
HEG1                  0.011   HEG homolog 1 
TCERG1L               0.011   transcription elongation regulator 1-like 
C19orf21              0.011   hypothetical protein LOC126353 
IHH                   0.006   Indian hedgehog homolog 
LOC100292576          0.006   PREDICTED: hypothetical protein 
LOC100288860          0.006   PREDICTED: hypothetical protein 
LOC100288860          0.006   PREDICTED: hypothetical protein XP_002343712 
GABBR2                0.006   G protein-coupled receptor 51 
EP400                 0.006   E1A binding protein p400 
WFIKKN2               0.006   WFIKKN2 protein 
TTLL5                 0.006   tubulin tyrosine ligase-like family, member 5 
LOC100293941          0.006   PREDICTED: hypothetical protein 
LOC100292054          0.006   PREDICTED: hypothetical protein XP_002345326 
LOC100290130          0.006   PREDICTED: hypothetical protein XP_002346833 
LOC728597             0.006   PREDICTED: doublecortin domain-containing protein E...
LOC100290779          0.006   PREDICTED: hypothetical protein XP_002346943 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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