Guide to the Human Genome
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Name: TOR3A Sequence: fasta or formatted (397aa) NCBI GI: 115647957
Description:

torsin family 3, member A

Referenced in:

Additional Brain Proteins
Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         21           2
 C cysteine            2.5         10           2
 D aspartate           4.5         18           2
 E glutamate           8.6         34           2
 F phenylalanine       5.3         21           2
 G glycine             6.5         26           1
 H histidine           3.3         13           1
 I isoleucine          3.8         15           2
 K lysine              3.3         13           1
 L leucine            14.6         58           4
 M methionine          2.0          8           2
 N asparagine          2.5         10           2
 P proline             5.8         23           1
 Q glutamine           5.3         21           2
 R arginine            7.1         28           2
 S serine              5.0         20           2
 T threonine           4.0         16           2
 V valine              4.3         17           2
 W tryptophan          3.3         13           1
 Y tyrosine            3.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   torsin family 3, member A 
TOR1A                 0.275   torsin A 
TOR1B                 0.268   torsin family 1, member B (torsin B) 
TOR2A                 0.233   torsin family 2, member A isoform a 
TOR2A                 0.125   torsin family 2, member A isoform b 
TOR2A                 0.125   torsin family 2, member A isoform c 
C9orf167              0.048   hypothetical protein LOC54863 
CLPB                  0.021   caseinolytic peptidase B 
CHD1L                 0.007   chromodomain helicase DNA binding protein 1-like [H...
TESSP1                0.007   testis-specific serine protease 1 
OTUD1                 0.006   OTU domain containing 1 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 1 
RBM17                 0.006   RNA binding motif protein 17 
RBM17                 0.006   RNA binding motif protein 17 
FAT3                  0.006   FAT tumor suppressor homolog 3 
TMPRSS11D             0.006   transmembrane protease, serine 11D 
COL15A1               0.005   alpha 1 type XV collagen precursor 
ATM                   0.005   ataxia telangiectasia mutated isoform 1 
LOC651610             0.005   PREDICTED: similar to Serine-protein kinase ATM, pa...
LOC730426             0.005   PREDICTED: similar to NAV1 protein 
NAV1                  0.005   neuron navigator 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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