Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NDST2 Sequence: fasta or formatted (883aa) NCBI GI: 4505353
Description:

heparan glucosaminyl N-deacetylase/N-sulfotransferase 2

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         46           2
 C cysteine            1.1         10           1
 D aspartate           4.6         41           3
 E glutamate           4.9         43           3
 F phenylalanine       5.7         50           2
 G glycine             6.8         60           2
 H histidine           3.7         33           2
 I isoleucine          3.7         33           2
 K lysine              3.4         30           1
 L leucine            13.3        117           3
 M methionine          1.5         13           1
 N asparagine          3.1         27           1
 P proline             7.7         68           2
 Q glutamine           4.0         35           1
 R arginine            7.1         63           2
 S serine              6.8         60           2
 T threonine           5.9         52           2
 V valine              5.4         48           2
 W tryptophan          1.9         17           2
 Y tyrosine            4.2         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heparan glucosaminyl N-deacetylase/N-sulfotransferase... 
NDST1                 0.715   N-deacetylase/N-sulfotransferase (heparan glucosaminy...
NDST4                 0.681   heparan sulfate N-deacetylase/N-sulfotransferase 4 [...
NDST3                 0.669   N-deacetylase/N-sulfotransferase (heparan glucosaminy...
HS3ST5                0.057   heparan sulfate (glucosamine) 3-O-sulfotransferase 5...
HS3ST2                0.057   heparan sulfate D-glucosaminyl  3-O-sulfotransferase ...
HS3ST4                0.054   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
HS3ST3B1              0.054   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST3A1              0.054   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST1                0.053   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...
HS3ST6                0.052   heparan sulfate (glucosamine) 3-O-sulfotransferase ...
CHST15                0.011   B cell RAG associated protein 
UNCX                  0.009   UNC homeobox 
COL18A1               0.008   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.008   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.008   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
ADAM15                0.008   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.008   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.008   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.008   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.008   a disintegrin and metalloproteinase domain 15 isofor...
SASH1                 0.007   SAM and SH3 domain containing 1 
CMTM2                 0.007   chemokine-like factor superfamily 2 
KLHL17                0.007   kelch-like 17 
SULT1C3               0.006   sulfotransferase family, cytosolic, 1C, member 3 [Ho...
CAP1                  0.006   adenylyl cyclase-associated protein 
CAP1                  0.006   adenylyl cyclase-associated protein 
AGAP2                 0.006   centaurin, gamma 1 isoform PIKE-L 
FMN1                  0.006   formin 1 
NUMBL                 0.006   numb homolog (Drosophila)-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press