Guide to the Human Genome
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Name: TCERG1L Sequence: fasta or formatted (586aa) NCBI GI: 148727264
Description:

transcription elongation regulator 1-like

Referenced in:

RNA Polymerase and General Transcription Factors
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         46           6
 C cysteine            0.9          5           1
 D aspartate           4.6         27           2
 E glutamate           6.7         39           2
 F phenylalanine       4.3         25           3
 G glycine             5.1         30           3
 H histidine           2.4         14           1
 I isoleucine          3.1         18           2
 K lysine              6.7         39           2
 L leucine            10.1         59           3
 M methionine          1.7         10           1
 N asparagine          2.6         15           2
 P proline            12.6         74           6
 Q glutamine           3.6         21           4
 R arginine            8.5         50           4
 S serine              7.3         43           3
 T threonine           4.1         24           2
 V valine              5.6         33           3
 W tryptophan          1.9         11           1
 Y tyrosine            0.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription elongation regulator 1-like 
TCERG1                0.212   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.212   transcription elongation regulator 1 isoform 1 [Homo...
PRPF40A               0.042   formin binding protein 3 
PRPF40B               0.037   Huntingtin interacting protein C isoform 2 
PRPF40B               0.037   Huntingtin interacting protein C isoform 1 
RAPH1                 0.025   Ras association and pleckstrin homology domains 1 is...
SRCAP                 0.023   Snf2-related CBP activator protein 
DIAPH1                0.022   diaphanous 1 isoform 2 
DIAPH1                0.022   diaphanous 1 isoform 1 
GGN                   0.021   gametogenetin 
FMN2                  0.020   formin 2 
MYO15A                0.020   myosin XV 
MBD6                  0.019   methyl-CpG binding domain protein 6 
WAS                   0.018   Wiskott-Aldrich syndrome protein 
FMN1                  0.018   formin 1 
CASKIN1               0.018   CASK interacting protein 1 
WNK2                  0.018   WNK lysine deficient protein kinase 2 
INF2                  0.017   inverted formin 2 isoform 2 
INF2                  0.017   inverted formin 2 isoform 1 
HTT                   0.017   huntingtin 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
CPSF6                 0.017   cleavage and polyadenylation specific factor 6, 68 ...
RERE                  0.017   atrophin-1 like protein isoform b 
RERE                  0.017   atrophin-1 like protein isoform a 
RERE                  0.017   atrophin-1 like protein isoform a 
NCCRP1                0.016   non-specific cytotoxic cell receptor protein 1 homol...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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