Guide to the Human Genome
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Name: NXPH4 Sequence: fasta or formatted (308aa) NCBI GI: 39930315
Description:

neurexophilin 4

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         34           5
 C cysteine            1.9          6           1
 D aspartate           1.9          6           1
 E glutamate           3.2         10           1
 F phenylalanine       5.5         17           1
 G glycine            11.7         36           2
 H histidine           2.9          9           1
 I isoleucine          2.3          7           1
 K lysine              5.2         16           2
 L leucine            11.0         34           3
 M methionine          0.6          2           1
 N asparagine          2.3          7           1
 P proline             9.1         28           2
 Q glutamine           3.6         11           2
 R arginine            5.5         17           1
 S serine              7.1         22           3
 T threonine           3.2         10           1
 V valine              6.5         20           1
 W tryptophan          2.6          8           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurexophilin 4 
NXPH1                 0.304   neurexophilin 1 precursor 
NXPH2                 0.265   neurexophilin 2 
NXPH3                 0.142   neurexophilin 3 
FAM55C                0.026   hypothetical protein LOC91775 
FAM55C                0.026   hypothetical protein LOC91775 
CHCHD2                0.019   coiled-coil-helix-coiled-coil-helix domain containing...
LOC100287184          0.016   PREDICTED: hypothetical protein XP_002343805 
COL14A1               0.016   collagen, type XIV, alpha 1 
TPRX1                 0.016   tetra-peptide repeat homeobox 
ELN                   0.016   elastin isoform e precursor 
ELN                   0.016   elastin isoform a precursor 
FAM181B               0.016   hypothetical protein LOC220382 
LOC100293055          0.015   PREDICTED: similar to COL22A1 protein 
ELN                   0.015   elastin isoform b precursor 
COL11A2               0.013   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.013   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.013   collagen, type XI, alpha 2 isoform 1 preproprotein ...
ELN                   0.013   elastin isoform d precursor 
ELN                   0.013   elastin isoform c precursor 
KIAA1522              0.013   hypothetical protein LOC57648 
SOX17                 0.013   SRY-box 17 
KRT5                  0.013   keratin 5 
TAL1                  0.013   T-cell acute lymphocytic leukemia 1 
IQSEC2                0.013   IQ motif and Sec7 domain 2 isoform1 
POU3F1                0.013   POU domain, class 3, transcription factor 1 
LOC645317             0.011   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.011   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.011   PREDICTED: similar to coiled-coil-helix-coiled-coil...
COL1A2                0.011   alpha 2 type I collagen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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