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Search of human proteins with 30410033
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410033 late cornified envelope 3E [Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410033 late cornified envelope 3E [Homo sapiens] 219 4e-58
gi|14211869 late cornified envelope 3D [Homo sapiens] 209 4e-55
gi|30410037 late cornified envelope 3C [Homo sapiens] 174 2e-44
gi|30410041 late cornified envelope 3B [Homo sapiens] 161 9e-41
gi|30410039 late cornified envelope 3A [Homo sapiens] 153 3e-38
gi|30387642 late cornified envelope 4A [Homo sapiens] 127 2e-30
gi|7657685 late cornified envelope 2B [Homo sapiens] 120 3e-28
gi|30410035 late cornified envelope 5A [Homo sapiens] 120 3e-28
gi|30410047 late cornified envelope 2C [Homo sapiens] 117 2e-27
gi|30410043 late cornified envelope 2D [Homo sapiens] 115 8e-27
gi|30410045 late cornified envelope 2A [Homo sapiens] 114 1e-26
gi|30387654 late cornified envelope 1A [Homo sapiens] 111 1e-25
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 107 2e-24
gi|30387650 late cornified envelope 1E [Homo sapiens] 107 2e-24
gi|30387652 late cornified envelope 1C [Homo sapiens] 105 1e-23
gi|30387648 late cornified envelope 1D [Homo sapiens] 103 2e-23
gi|30387646 late cornified envelope 1F [Homo sapiens] 103 4e-23
gi|30387656 late cornified envelope 1B [Homo sapiens] 102 9e-23
gi|5174693 small proline-rich protein 2A [Homo sapiens] 45 2e-05
gi|62955831 small proline-rich protein 2B [Homo sapiens] 45 2e-05
gi|83582817 small proline-rich protein 2E [Homo sapiens] 45 2e-05
gi|62945419 small proline-rich protein 2F [Homo sapiens] 44 3e-05
gi|62122851 small proline-rich protein 2G [Homo sapiens] 43 5e-05
gi|56699492 small proline-rich protein 2D [Homo sapiens] 43 5e-05
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 42 8e-05
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 42 1e-04
gi|87299628 biorientation of chromosomes in cell division 1-like... 38 0.002
gi|55770876 notch4 preproprotein [Homo sapiens] 38 0.002
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 38 0.002
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 38 0.002
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 219 bits (558), Expect = 4e-58
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH
Sbjct: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
Query: 61 HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC
Sbjct: 61 HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 209 bits (532), Expect = 4e-55
Identities = 88/92 (95%), Positives = 90/92 (97%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
MSCQQNQ+QCQPPPKCPSPKCPPK+PVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH
Sbjct: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
Query: 61 HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
HRCRRQR NSCDRGSGQQGGGSGC HGSGGCC
Sbjct: 61 HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 174 bits (440), Expect = 2e-44
Identities = 77/94 (81%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHR-- 58
MSCQQNQ+QCQPPP CPSPKCPPK+P QCLPP SS CA SSGGCGPSSE GC L+HHR
Sbjct: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
Query: 59 RHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
R H+CRRQRSNSCDRGSGQQGGGS HGSGGCC
Sbjct: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 161 bits (408), Expect = 9e-41
Identities = 74/95 (77%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGC-GPSSEGGCFLNHHR- 58
MSCQQNQ+QCQP PKCPSPKCPPK+ QCLPPASS CAP G C GPSSEGGC L+HHR
Sbjct: 1 MSCQQNQQQCQPLPKCPSPKCPPKSSAQCLPPASSCCAPRPGCCGGPSSEGGCCLSHHRC 60
Query: 59 -RHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
R HRCRRQ SNSCDRGSGQQ G S C +GSGGCC
Sbjct: 61 CRSHRCRRQSSNSCDRGSGQQDGASDCGYGSGGCC 95
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 153 bits (386), Expect = 3e-38
Identities = 70/94 (74%), Positives = 74/94 (78%), Gaps = 7/94 (7%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHH--R 58
MSCQQNQ+QCQPPPKCP+ K+P QCLPPASS CAPSSGGCGPSSE C L+HH R
Sbjct: 1 MSCQQNQQQCQPPPKCPA-----KSPAQCLPPASSSCAPSSGGCGPSSERSCCLSHHRCR 55
Query: 59 RHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
R HRCR Q SNSCDRGSGQQGG S C H S GCC
Sbjct: 56 RSHRCRCQSSNSCDRGSGQQGGSSSCGHSSAGCC 89
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 127 bits (319), Expect = 2e-30
Identities = 63/100 (63%), Positives = 69/100 (69%), Gaps = 9/100 (9%)
Query: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCL----PPASSGCAPSSGGCG--PSSEGGCFL 54
MSCQQNQ+QCQPPPKCP PK PPK P +C PP SS C SSGGCG S GGC L
Sbjct: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
Query: 55 NHHRRHH-RCRRQRSNSC-DRGSGQQGGGSGCCHGSGGCC 92
+HHR H C R +S++C GSGQQ GGSGCC G GGCC
Sbjct: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG-GGCC 99
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 120 bits (300), Expect = 3e-28
Identities = 61/113 (53%), Positives = 68/113 (60%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQKQCQPPPKCP---SPKCPPKNPVQCLP---------------PASSGCA-PSS 41
MSCQQNQ+QCQPPPKCP +PKCPPK P +CLP P S GC PSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCLPQCPAPCSPAVSSCCGPISGGCCGPSS 60
Query: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
GGC S GGC L+HHR HR R Q + C+ + GGSGCCH SGGCC
Sbjct: 61 GGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 120 bits (300), Expect = 3e-28
Identities = 62/111 (55%), Positives = 66/111 (59%), Gaps = 19/111 (17%)
Query: 1 MSCQQNQKQCQPPPKCPS-----------PKCPPKNPVQCL----PPASSGCAPSSGGCG 45
MSCQQ+Q+QCQPPPKC PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
Query: 46 PSSEGGCFLNHHRRHHRCRR--QRSNSCDRGSGQQGGGSGCCHGSG--GCC 92
S GGC L+HHR RR Q S+ C GSGQQ GGS CCH SG GCC
Sbjct: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 117 bits (294), Expect = 2e-27
Identities = 60/113 (53%), Positives = 66/113 (58%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQKQCQPPPKCPS-----------PKCPPKNPVQCLPPASSGCAPSSGGC-GPSS 48
MSCQQNQ+QCQPPPKCP PKCPP+ P C P SS C PSSG C GPSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPSS 60
Query: 49 -------EGGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
GGC L+HHR HR R Q + C+ + GGSGCCH SGGCC
Sbjct: 61 GGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 115 bits (288), Expect = 8e-27
Identities = 59/113 (52%), Positives = 64/113 (56%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQKQCQPPPKCPS-------PKCPPKNPVQCLPPAS------------SGCAPSS 41
MSCQQNQ+QCQPPPKCP PKCPPK P QC P S S C PSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSS 60
Query: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
GGC S GGC L+HHR HR R Q + C+ + G SGCCH SGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGASGCCHSSGGCC 110
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 114 bits (286), Expect = 1e-26
Identities = 60/109 (55%), Positives = 65/109 (59%), Gaps = 20/109 (18%)
Query: 1 MSCQQNQKQCQPPPKCPS---PKCPPKN----PVQCLPPASSGCAPSSGGCGPSSEGGCF 53
MSCQQNQ+QCQPPPKCP PKCPPK P C PP SS C PSSGGC SS GGC
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCPPKCPPKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGGCC 60
Query: 54 --------LNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
L+HHR HR R Q + C+ + GGSGCCH SG CC
Sbjct: 61 SSGGGGCCLSHHRPRLFHRHRHQSPDCCEC---EPSGGSGCCHSSGDCC 106
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 111 bits (277), Expect = 1e-25
Identities = 62/115 (53%), Positives = 68/115 (59%), Gaps = 28/115 (24%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+Q+QCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGG 59
Query: 50 -----GGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHG-----SGGCC 92
GGC L+HHRRH HR R Q S C Q GGS CC G SGGCC
Sbjct: 60 CSSGGGGCCLSHHRRHRSHRHRLQSSGCC----SQPSGGSSCCGGDSGQHSGGCC 110
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 107 bits (267), Expect = 2e-24
Identities = 62/121 (51%), Positives = 68/121 (56%), Gaps = 32/121 (26%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+Q+QCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHG-----SGGC 91
GGC L+HH RHHR R R S D S Q GGS CC G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHH-RHHRSHRHRPQSSDCCS-QPSGGSSCCGGGSGQHSGGC 117
Query: 92 C 92
C
Sbjct: 118 C 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 107 bits (267), Expect = 2e-24
Identities = 62/121 (51%), Positives = 68/121 (56%), Gaps = 32/121 (26%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+Q+QCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHG-----SGGC 91
GGC L+HH RHHR R R S D S Q GGS CC G SGGC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHH-RHHRSHRHRPQSSDCCS-QPSGGSSCCGGGSGQHSGGC 117
Query: 92 C 92
C
Sbjct: 118 C 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 105 bits (261), Expect = 1e-23
Identities = 59/122 (48%), Positives = 67/122 (54%), Gaps = 34/122 (27%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+Q+QCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHH-RCRRQRSNSCDRGSGQQGGGSGCCHG-----SGG 90
GGC L+HHRR C R +S+ C Q GGS CC G SGG
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGC---CSQPSGGSSCCGGGSGQHSGG 116
Query: 91 CC 92
CC
Sbjct: 117 CC 118
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 103 bits (258), Expect = 2e-23
Identities = 57/118 (48%), Positives = 64/118 (54%), Gaps = 30/118 (25%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQ-----------CLPPASSGCAPSS 41
MSCQQ+Q+QCQPPPKC P+PKCPPK P C + GC +S
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
Query: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHG-----SGGCC 92
GGC S GGC L+HHRRH HR R Q S+ C Q GGS CC G SGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC----SQPSGGSSCCGGGSSQHSGGCC 114
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 103 bits (256), Expect = 4e-23
Identities = 60/123 (48%), Positives = 67/123 (54%), Gaps = 36/123 (29%)
Query: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+Q+QCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGC 59
Query: 50 -------------GGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHG-----SG 89
GGC L+HHRR HR R Q S+ C Q GS CC G SG
Sbjct: 60 CSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCC----SQPSAGSSCCGGGSGQHSG 115
Query: 90 GCC 92
GCC
Sbjct: 116 GCC 118
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 102 bits (253), Expect = 9e-23
Identities = 58/122 (47%), Positives = 66/122 (54%), Gaps = 34/122 (27%)
Query: 1 MSCQQNQKQCQP--------PPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQNQ+QCQP PPKC +P+CPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQNQQQCQPPPKCIPKCPPKCLTPRCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHH-RCRRQRSNSCDRGSGQQGGGSGCCHG-----SGG 90
GGC L+HHRR C R +S+ C Q GGS CC G SGG
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGC---CSQPSGGSSCCGGGSGQHSGG 116
Query: 91 CC 92
CC
Sbjct: 117 CC 118
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKC-----PPKNPVQCLPP 32
MS QQ Q + CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 33.9 bits (76), Expect = 0.029
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 12 PPPKCPSPKCPPKNPVQCLP 31
PPPKCP P PPK P C P
Sbjct: 28 PPPKCPEPCPPPKCPQPCPP 47
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKC-----PPKNPVQCLPP 32
MS QQ Q + CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 33.9 bits (76), Expect = 0.029
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 12 PPPKCPSPKCPPKNPVQCLP 31
PPPKCP P PPK P C P
Sbjct: 28 PPPKCPEPCPPPKCPQPCPP 47
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 CQQNQKQCQPPPKCPSPKCPPKNP 26
C Q Q + PP PSP C PK P
Sbjct: 45 CPPQQCQQKYPPVTPSPPCQPKYP 68
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKC-----PPKNPVQCLPP 32
MS QQ Q + CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 12 PPPKCPSPKCPPKNPVQCLP-------PASSGCAPSSGGCGPSSE 49
PPPKCP P PPK P C P P + P C P S+
Sbjct: 28 PPPKCPEPCPPPKCPQPCPPQQCQQKCPPVTPSPPCQPKCPPKSK 72
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 4 QQNQKQCQPPPKCPSPKCPPKNP 26
QQ Q++C PP PSP C PK P
Sbjct: 48 QQCQQKC--PPVTPSPPCQPKCP 68
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKCP-PKNPVQCLPPASSGCAPSSGGCGP 46
MS QQ Q + CQPPP CP+PKCP P P +C P P S C P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKCPQS--CPP 47
Score = 29.6 bits (65), Expect = 0.55
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 2 SCQQNQKQCQPPPKCPSPKCPPKNP 26
SC Q Q + PP PSP C PK P
Sbjct: 44 SCPPQQCQQKCPPVTPSPPCQPKCP 68
>gi|62122851 small proline-rich protein 2G [Homo sapiens]
Length = 73
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKC-----PPKNPVQCLPP 32
MS QQ Q + CQPPP CP+PKC PPK P LPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPP 39
Score = 32.7 bits (73), Expect = 0.065
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 12 PPPKCPSPKCPPKNPVQCLPP 32
PPPKCP P PP P + PP
Sbjct: 28 PPPKCPEPYLPPPCPPEHCPP 48
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 43.1 bits (100), Expect = 5e-05
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 1 MSCQQNQ--KQCQPPPKCPSPKCP-PKNPVQCLPPASSGCAP 39
MS QQ Q + CQPPP CP+PKCP P P +C P S P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSPKCP 42
Score = 33.9 bits (76), Expect = 0.029
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 14/44 (31%)
Query: 12 PPPKCP----SPKCP-PKNPVQC---------LPPASSGCAPSS 41
PPPKCP SPKCP P P QC PP C P S
Sbjct: 28 PPPKCPEPCPSPKCPQPCPPQQCQQKYPPVTPSPPCQPKCPPKS 71
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 3 CQQNQKQCQPPPKCPSPKCPPKNP 26
C Q Q + PP PSP C PK P
Sbjct: 45 CPPQQCQQKYPPVTPSPPCQPKCP 68
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 42.4 bits (98), Expect = 8e-05
Identities = 33/86 (38%), Positives = 35/86 (40%), Gaps = 18/86 (20%)
Query: 16 CPSPKCPPKNPVQCLPPASS-----GCAPSSGGCGP--SSEGGCFLNHHRRHHRCRRQRS 68
C P C K PV C PA S C S GGCG SS+GGC C +S
Sbjct: 35 CCVPICCCK-PVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGC--------GSCGCSQS 85
Query: 69 NSCDRGSGQQGGGSGCCHGSGG--CC 92
N C G GS CC S CC
Sbjct: 86 NCCKPCCSSSGCGSFCCQSSCSKPCC 111
Score = 32.3 bits (72), Expect = 0.084
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 22/57 (38%)
Query: 36 GCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
GC SGGCG S GGC GSG G GSGC CC
Sbjct: 2 GCCGCSGGCG-SGCGGC---------------------GSGSGGCGSGCGGCGSSCC 36
Score = 30.8 bits (68), Expect = 0.25
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 36 GCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQ-------RSNSCDRGSGQQGGGSGCCHGS 88
GC SGGCG S GGC + C+ +SC G +GG C
Sbjct: 16 GCGSGSGGCG-SGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSK 74
Query: 89 GGC 91
GGC
Sbjct: 75 GGC 77
Score = 30.4 bits (67), Expect = 0.32
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 22/52 (42%)
Query: 34 SSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCC 85
S GC GGCG S GGC GSG G GS CC
Sbjct: 7 SGGCGSGCGGCG-SGSGGC---------------------GSGCGGCGSSCC 36
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 42.0 bits (97), Expect = 1e-04
Identities = 32/92 (34%), Positives = 34/92 (36%), Gaps = 27/92 (29%)
Query: 11 QPPPKCPSPKCPPKNPVQCLPPASS--------GCAPSSGGCGPSSEGGCFLNHHRRHHR 62
Q P CP+P P PASS GC SG CG SS C R
Sbjct: 19 QGPAPCPAPAPTPA-------PASSSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRR---- 67
Query: 63 CRRQRSNSC-------DRGSGQQGGGSGCCHG 87
RRQRS+ C R SGCC G
Sbjct: 68 -RRQRSSGCCCCGGGSQRSQRSNNRSSGCCSG 98
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 9 QCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEG 50
Q QPPP P P P P PP G P +GG G + G
Sbjct: 6 QPQPPPPAPPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAG 47
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 22/99 (22%)
Query: 10 CQPPPKCPSPKCPPK--------NPVQCLPPASSGCAPSS-----GGCGPSSEGG----- 51
C P PK P PP+ P PPA GC P S G C ++ G
Sbjct: 1102 CLPSPK---PGFPPRCACLSGYGGPDCLTPPAPKGCGPPSPCLYNGSCSETTGLGGPGFR 1158
Query: 52 CFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGG 90
C H RC++ + C+ SG +G C G GG
Sbjct: 1159 CSCPHSSPGPRCQKPGAKGCEGRSGDGACDAG-CSGPGG 1196
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 19/82 (23%)
Query: 16 CPSPKCPPKNPVQCLPPASSGCAPSSGGCGPS--SEGGCFLNHHRRHHRCRRQRSNSCDR 73
C P C K PV C P S + GGCG S S+GGC C
Sbjct: 42 CCVPVCCCK-PVCCRVPTCSCSSCGKGGCGSSGGSKGGC-------------GSCGGCKG 87
Query: 74 GSGQQGG---GSGCCHGSGGCC 92
G G GG G G C GS G C
Sbjct: 88 GCGSCGGSKGGCGSCGGSKGGC 109
Score = 35.4 bits (80), Expect = 0.010
Identities = 26/92 (28%), Positives = 28/92 (30%), Gaps = 20/92 (21%)
Query: 3 CQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPS---SGGCGPSSEGGCFLNHHRR 59
C + C P C P C C GC S GGCG S GGC
Sbjct: 35 CGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCG--SCGGC------- 85
Query: 60 HHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGC 91
C G +GG C GGC
Sbjct: 86 --------KGGCGSCGGSKGGCGSCGGSKGGC 109
Score = 35.0 bits (79), Expect = 0.013
Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 19/88 (21%)
Query: 10 CQPPPKCPSPKC---PPKNPVQCLPPASSGCAPSSGGCGP--SSEGGCFLNHHRRHHRCR 64
C P C P C P + C C S G CG S+GGC
Sbjct: 130 CCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGC------------ 177
Query: 65 RQRSNSCDRGSGQQGGG-SGCCHGSGGC 91
C G G GG GC G GGC
Sbjct: 178 -GSCGGCKGGCGSCGGSKGGCGSGCGGC 204
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 22/59 (37%)
Query: 34 SSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
S GC S GGCG S GGC GSG G GSGC CC
Sbjct: 7 SGGCGSSCGGCG-SGCGGC---------------------GSGCGGCGSGCGGSGSSCC 43
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 35 SGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSN--SCDRGS-GQQGGGSGCCHGSGGC 91
SGC GCG S C + CR + SC +G G GG G C GGC
Sbjct: 26 SGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGC 85
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 17/83 (20%)
Query: 10 CQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSN 69
C P C S C A C S GGCG S GGC
Sbjct: 143 CVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCG--SCGGC---------------KG 185
Query: 70 SCDRGSGQQGGGSGCCHGSGGCC 92
C G +GG C G G C
Sbjct: 186 GCGSCGGSKGGCGSGCGGCGSGC 208
Score = 30.4 bits (67), Expect = 0.32
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 16/71 (22%)
Query: 26 PVQCLPPASSG-CAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGC 84
PV C +S G CA S GGCG S +C + C G G S C
Sbjct: 211 PVCCCSCSSCGSCAGSKGGCGSSCS------------QCSCCKPCCCSSGCGSSCCQSSC 258
Query: 85 CH---GSGGCC 92
C CC
Sbjct: 259 CKPCCSQSSCC 269
Score = 26.6 bits (57), Expect = 4.6
Identities = 21/83 (25%), Positives = 25/83 (30%), Gaps = 38/83 (45%)
Query: 33 ASSGCAPSSGGCGPS-----------------------SEGGCFLNHHRRHHRCRRQRSN 69
+ GC GGCG S +GGC S
Sbjct: 115 SKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGC--------------GSC 160
Query: 70 SCDRGS-GQQGGGSGCCHGSGGC 91
C +G+ G GG G C GGC
Sbjct: 161 GCSKGACGSCGGSKGGCGSCGGC 183
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 2 SCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGP--SSEGGCFLNHHRR 59
SC +C P C P C C S C S GGCG S+GGC +
Sbjct: 48 SCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGS--CGGSKGGCGSCGGSKGGCGSCGGSK 105
Query: 60 H--HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
C +S+ C G GS CC S CC
Sbjct: 106 GGCGSCGCSQSSCCKPCCCSSGCGSSCCQSS--CC 138
Score = 33.9 bits (76), Expect = 0.029
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 14/59 (23%)
Query: 34 SSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHGS-GGC 91
S GC GGCG SS GGC C G G G G G C S GGC
Sbjct: 7 SRGCGSGCGGCG-SSCGGC------------GSGCGGCGSGRGGCGSGCGGCSSSCGGC 52
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 36 GCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDR--GSGQQGGGSGCCHGSGGCC 92
GC+ S GGCG C++ C + SC G GG G C GS G C
Sbjct: 44 GCSSSCGGCG----SRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGC 98
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.505
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,328,169
Number of Sequences: 37866
Number of extensions: 405220
Number of successful extensions: 5695
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 3949
Number of HSP's gapped (non-prelim): 1486
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.