Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 30387642
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30387642 late cornified envelope 4A [Homo sapiens]
(99 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30387642 late cornified envelope 4A [Homo sapiens] 239 3e-64
gi|30410035 late cornified envelope 5A [Homo sapiens] 162 5e-41
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 151 9e-38
gi|30387650 late cornified envelope 1E [Homo sapiens] 151 9e-38
gi|30387652 late cornified envelope 1C [Homo sapiens] 149 4e-37
gi|30387656 late cornified envelope 1B [Homo sapiens] 149 5e-37
gi|30410045 late cornified envelope 2A [Homo sapiens] 147 2e-36
gi|30387646 late cornified envelope 1F [Homo sapiens] 143 3e-35
gi|30387654 late cornified envelope 1A [Homo sapiens] 142 4e-35
gi|30387648 late cornified envelope 1D [Homo sapiens] 140 2e-34
gi|30410043 late cornified envelope 2D [Homo sapiens] 139 6e-34
gi|7657685 late cornified envelope 2B [Homo sapiens] 138 8e-34
gi|30410047 late cornified envelope 2C [Homo sapiens] 134 2e-32
gi|30410033 late cornified envelope 3E [Homo sapiens] 127 2e-30
gi|30410037 late cornified envelope 3C [Homo sapiens] 125 7e-30
gi|14211869 late cornified envelope 3D [Homo sapiens] 123 4e-29
gi|30410041 late cornified envelope 3B [Homo sapiens] 122 5e-29
gi|30410039 late cornified envelope 3A [Homo sapiens] 108 7e-25
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 58 1e-09
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 53 5e-08
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 52 8e-08
gi|5174693 small proline-rich protein 2A [Homo sapiens] 51 2e-07
gi|62955831 small proline-rich protein 2B [Homo sapiens] 51 2e-07
gi|83582817 small proline-rich protein 2E [Homo sapiens] 51 2e-07
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 50 3e-07
gi|62945419 small proline-rich protein 2F [Homo sapiens] 50 4e-07
gi|56699492 small proline-rich protein 2D [Homo sapiens] 48 1e-06
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 48 2e-06
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 47 2e-06
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 47 3e-06
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 239 bits (611), Expect = 3e-64
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL
Sbjct: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
Query: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC
Sbjct: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 162 bits (410), Expect = 5e-41
Identities = 75/113 (66%), Positives = 83/113 (73%), Gaps = 16/113 (14%)
Query: 1 MSCQQNQQQCQPPPKCPI-----------PKYPPKCPSKCASSCPPPISSCCGSSSGGCG 49
MSCQQ+QQQCQPPPKC PK PPKCP +C++ CPPP+SSCCGSSSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGC- 59
Query: 50 CCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC---SGGGCC 99
CSSEGGGCCLSHHR +S RP+SS+C GSGSGQQSGGS CC G GCC
Sbjct: 60 -CSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 151 bits (382), Expect = 9e-38
Identities = 75/123 (60%), Positives = 80/123 (65%), Gaps = 29/123 (23%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPP---PISSCCGSSSGGC-------- 48
MSCQQ+QQQCQPPPKC PK PPKCP+ KC CPP P+SSCC SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGS 59
Query: 49 ------GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------G 96
GCCSS GGGCCLSHHRHHRSH HRP+SS+C Q SGGS CC G G
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDC----CSQPSGGSSCCGGGSGQHSG 115
Query: 97 GCC 99
GCC
Sbjct: 116 GCC 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 151 bits (382), Expect = 9e-38
Identities = 75/123 (60%), Positives = 80/123 (65%), Gaps = 29/123 (23%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPP---PISSCCGSSSGGC-------- 48
MSCQQ+QQQCQPPPKC PK PPKCP+ KC CPP P+SSCC SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGS 59
Query: 49 ------GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------G 96
GCCSS GGGCCLSHHRHHRSH HRP+SS+C Q SGGS CC G G
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDC----CSQPSGGSSCCGGGSGQHSG 115
Query: 97 GCC 99
GCC
Sbjct: 116 GCC 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 149 bits (377), Expect = 4e-37
Identities = 74/123 (60%), Positives = 78/123 (63%), Gaps = 29/123 (23%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPP---PISSCCGSSSGGC-------- 48
MSCQQ+QQQCQPPPKC PK PPKCP+ KC CPP P+SSCC SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGS 59
Query: 49 ------GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------G 96
GCCSS GGGCCLSHHR RSHCHRP+SS C Q SGGS CC G G
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGC----CSQPSGGSSCCGGGSGQHSG 115
Query: 97 GCC 99
GCC
Sbjct: 116 GCC 118
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 149 bits (376), Expect = 5e-37
Identities = 75/124 (60%), Positives = 77/124 (62%), Gaps = 31/124 (25%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKC-----PSKCASSCPPPISSCCGSSSGGC------- 48
MSCQQNQQQCQPPPKC IPK PPKC P KC CPP +SSCC SSGGC
Sbjct: 1 MSCQQNQQQCQPPPKC-IPKCPPKCLTPRCPPKCPPKCPP-VSSCCSVSSGGCCGSSSGG 58
Query: 49 -------GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------ 95
GCCSS GGGCCLSHHR RSHCHRP+SS C Q SGGS CC G
Sbjct: 59 SCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGC----CSQPSGGSSCCGGGSGQHS 114
Query: 96 GGCC 99
GGCC
Sbjct: 115 GGCC 118
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 147 bits (371), Expect = 2e-36
Identities = 71/110 (64%), Positives = 76/110 (69%), Gaps = 15/110 (13%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCA----SSCPPPISSCCGSSSGGC------GC 50
MSCQQNQQQCQPPPKCP PK PPKCP KC + CPPP+SSCCG SSGGC GC
Sbjct: 1 MSCQQNQQQCQPPPKCP-PKCPPKCPPKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGGC 59
Query: 51 CSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC-SGGGCC 99
CSS GGGCCLSHHR H HR +S +C + SGGSGCC S G CC
Sbjct: 60 CSSGGGGCCLSHHRPRLFHRHRHQSPDCC---ECEPSGGSGCCHSSGDCC 106
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 143 bits (361), Expect = 3e-35
Identities = 74/123 (60%), Positives = 79/123 (64%), Gaps = 29/123 (23%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPP---PISSCC--------GSSSGGC 48
MSCQQ+QQQCQPPPKC PK PPKCP+ KC CPP P+SSCC GSSSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGC 59
Query: 49 ------GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------G 96
GCCSS GGGCCLSHHR RSH HRP+SS+C Q S GS CC G G
Sbjct: 60 CSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDC----CSQPSAGSSCCGGGSGQHSG 115
Query: 97 GCC 99
GCC
Sbjct: 116 GCC 118
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 142 bits (359), Expect = 4e-35
Identities = 72/115 (62%), Positives = 76/115 (66%), Gaps = 21/115 (18%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPP---PISSCCGSSSGGC------GC 50
MSCQQ+QQQCQPPPKC PK PPKCP+ KC CPP P+SSCC SSGGC G
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGG 59
Query: 51 CSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------GGCC 99
CSS GGGCCLSHHR HRSH HR +SS C Q SGGS CC G GGCC
Sbjct: 60 CSSGGGGCCLSHHRRHRSHRHRLQSSGC----CSQPSGGSSCCGGDSGQHSGGCC 110
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 140 bits (353), Expect = 2e-34
Identities = 71/120 (59%), Positives = 76/120 (63%), Gaps = 27/120 (22%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPPPISSCCGSSSGGC----------- 48
MSCQQ+QQQCQPPPKC PK PKCP+ KC CPP +SSCC SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCT-PKCTPKCPAPKCPPKCPP-VSSCCSVSSGGCCGSSSGGGCGS 58
Query: 49 ---GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------GGCC 99
GCCSS GGGCCLSHHR HRSH RP+SS+C Q SGGS CC G GGCC
Sbjct: 59 NSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDC----CSQPSGGSSCCGGGSSQHSGGCC 114
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 139 bits (349), Expect = 6e-34
Identities = 67/113 (59%), Positives = 73/113 (64%), Gaps = 17/113 (15%)
Query: 1 MSCQQNQQQCQPPPKCPI-------PKYPPKCPSKCASSCPPPISSCCGSSSGGC----- 48
MSCQQNQQQCQPPPKCP PK PPKCP +C + C P +SSCCG SSG C
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSS 60
Query: 49 -GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC-SGGGCC 99
GCCSS GGGCCLSHHR H R +S +C S + SG SGCC S GGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCES---EPSGASGCCHSSGGCC 110
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 138 bits (348), Expect = 8e-34
Identities = 68/113 (60%), Positives = 73/113 (64%), Gaps = 17/113 (15%)
Query: 1 MSCQQNQQQCQPPPKCP---IPKYPPKCPSKCASSCPPP----ISSCCGSSSGGC----- 48
MSCQQNQQQCQPPPKCP PK PPKCP KC CP P +SSCCG SGGC
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCLPQCPAPCSPAVSSCCGPISGGCCGPSS 60
Query: 49 -GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC-SGGGCC 99
GCC+S GGCCLSHHR H R +S +C S + SGGSGCC S GGCC
Sbjct: 61 GGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCES---EPSGGSGCCHSSGGCC 110
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 134 bits (336), Expect = 2e-32
Identities = 66/113 (58%), Positives = 72/113 (63%), Gaps = 17/113 (15%)
Query: 1 MSCQQNQQQCQPPPKCPI-------PKYPPKCPSKCASSCPPPISSCCGSSSGGC----- 48
MSCQQNQQQCQPPPKCP PK PPKCP +C + C P +SSCCG SSG C
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPSS 60
Query: 49 -GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC-SGGGCC 99
GCCSS GGC LSHHR H R +S +C S + SGGSGCC S GGCC
Sbjct: 61 GGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCES---EPSGGSGCCHSSGGCC 110
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 127 bits (319), Expect = 2e-30
Identities = 63/100 (63%), Positives = 69/100 (69%), Gaps = 9/100 (9%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQ+QCQPPPKCP PK PPK P +C PP SS C SSGGCG S GGC L
Sbjct: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCL----PPASSGCAPSSGGCG--PSSEGGCFL 54
Query: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG-GGCC 99
+HHR H C R +S++C GSGQQ GGSGCC G GGCC
Sbjct: 55 NHHRRHH-RCRRQRSNSC-DRGSGQQGGGSGCCHGSGGCC 92
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 125 bits (314), Expect = 7e-30
Identities = 65/103 (63%), Positives = 70/103 (67%), Gaps = 13/103 (12%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQQQCQPPP CP PK PPK P++C PP SS C SSGGCG S GCCL
Sbjct: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCL----PPPSSDCALSSGGCG--PSSESGCCL 54
Query: 61 SHHRHHRSH-CHRPKSSNCYGSGSGQQSGGSGCCSG---GGCC 99
SHHRH RSH C R +S++C GSGQQ GGS C G GGCC
Sbjct: 55 SHHRHFRSHQCRRQRSNSC-DRGSGQQGGGS--CRGHGSGGCC 94
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 123 bits (308), Expect = 4e-29
Identities = 62/100 (62%), Positives = 67/100 (67%), Gaps = 9/100 (9%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQQQCQPPPKCP PK PPK P +C PP SS C SSGGCG S GGC L
Sbjct: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCL----PPASSGCAPSSGGCG--PSSEGGCFL 54
Query: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG-GGCC 99
+HHR H C R + ++C GSGQQ GGSGC G GGCC
Sbjct: 55 NHHRRHH-RCRRQRPNSC-DRGSGQQGGGSGCGHGSGGCC 92
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 122 bits (307), Expect = 5e-29
Identities = 63/100 (63%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQQQCQP PKCP PKCP K ++ C PP SSCC G CG SSE GGCCL
Sbjct: 1 MSCQQNQQQCQPLPKCP----SPKCPPKSSAQCLPPASSCCAPRPGCCGGPSSE-GGCCL 55
Query: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG-GGCC 99
SHHR RSH R +SSN GSGQQ G S C G GGCC
Sbjct: 56 SHHRCCRSHRCRRQSSNSCDRGSGQQDGASDCGYGSGGCC 95
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 108 bits (271), Expect = 7e-25
Identities = 57/100 (57%), Positives = 60/100 (60%), Gaps = 12/100 (12%)
Query: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
MSCQQNQQQCQPPPKCP +K + C PP SS C SSGGCG S CCL
Sbjct: 1 MSCQQNQQQCQPPPKCP---------AKSPAQCLPPASSSCAPSSGGCGPSSERS--CCL 49
Query: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGC-CSGGGCC 99
SHHR RSH R +SSN GSGQQ G S C S GCC
Sbjct: 50 SHHRCRRSHRCRCQSSNSCDRGSGQQGGSSSCGHSSAGCC 89
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 58.2 bits (139), Expect = 1e-09
Identities = 32/83 (38%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 22 PPKCPSKCASSCPPPISSCCGSSSGGC---GCCSSEGGGCCLSHHRHHRSHCHRPKSSNC 78
P CP+ + P SSCCGS G C GCC S CC R R +SS C
Sbjct: 21 PAPCPAPAPTPAPASSSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRRRRQ-----RSSGC 75
Query: 79 YGSGSGQQ------SGGSGCCSG 95
G G Q + SGCCSG
Sbjct: 76 CCCGGGSQRSQRSNNRSSGCCSG 98
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 70 CHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
C P + S S G GCC GCC
Sbjct: 24 CPAPAPTPAPASSSSCCGSGRGCCGDSGCC 53
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 75 SSNCYGSGSGQQSGGSGCC--SGGGCC 99
SS+C GSG G G SGCC S CC
Sbjct: 36 SSSCCGSGRG-CCGDSGCCGSSSTSCC 61
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 53.1 bits (126), Expect = 5e-08
Identities = 36/104 (34%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 2 SCQQNQQQCQPPPKC--PIPKYPPKCPSKCASSCPPPISSC--CGSSSGGCGCCSSEGGG 57
SC +C P C P+ + P C SC C CG S GGCG C GG
Sbjct: 48 SCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGG 107
Query: 58 CCLSHHRHHRSHCHRPK--SSNCYGSGSGQQSGGSGCCSGGGCC 99
C +S C +P SS C GS Q S CC CC
Sbjct: 108 C--GSCGCSQSSCCKPCCCSSGC-GSSCCQSSCCKPCCCQSSCC 148
Score = 43.1 bits (100), Expect = 5e-05
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 23/66 (34%)
Query: 40 CCGSSSG---GCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGC--CS 94
CCG S G GCG C S GGC S C G GSG+ GSGC CS
Sbjct: 3 CCGCSRGCGSGCGGCGSSCGGC----------------GSGCGGCGSGRGGCGSGCGGCS 46
Query: 95 G--GGC 98
GGC
Sbjct: 47 SSCGGC 52
Score = 43.1 bits (100), Expect = 5e-05
Identities = 33/93 (35%), Positives = 36/93 (38%), Gaps = 19/93 (20%)
Query: 25 CPSKCASSCPPPISSCCGSSSG-------------GCGCCSSEGGGC---CLSHHRHHRS 68
C C S C SSC G SG GCG CSS GGC C +
Sbjct: 6 CSRGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCCKP 65
Query: 69 HCHRPKSSNCYGSGS-GQQSGGSGCCSG--GGC 98
C + +C GS G GG G C G GGC
Sbjct: 66 VCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGC 98
Score = 30.0 bits (66), Expect = 0.41
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 17/75 (22%)
Query: 25 CPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSG 84
C +S C P CC SS G CC S CC + C + S+C
Sbjct: 111 CGCSQSSCCKP----CCCSSGCGSSCCQS---SCC-------KPCCCQ---SSCCVPVCC 153
Query: 85 QQSGGSGCCSGGGCC 99
Q S CC CC
Sbjct: 154 QSSCCKPCCCQSNCC 168
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/73 (43%), Positives = 33/73 (45%), Gaps = 22/73 (30%)
Query: 27 SKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQ 86
S C SC SSCCGS GGCG C GGGCC S+C GS
Sbjct: 46 SGCGGSCCG--SSCCGSGCGGCGGCGGCGGGCC---------------GSSCCGS----S 84
Query: 87 SGGSGCCSGGGCC 99
GSGCC G CC
Sbjct: 85 CCGSGCC-GPVCC 96
Score = 45.4 bits (106), Expect = 9e-06
Identities = 36/101 (35%), Positives = 38/101 (37%), Gaps = 25/101 (24%)
Query: 3 CQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGG--CG--CCSSEGGGC 58
C Q Q C+ +C P C C S C S C GS GG CG CC S GGC
Sbjct: 12 CTQEQNCCE---ECCCQ---PGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGC 65
Query: 59 CLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
C C G G GS CC G GCC
Sbjct: 66 ---------GGC-----GGCGGGCCGSSCCGSSCC-GSGCC 91
Score = 42.0 bits (97), Expect = 1e-04
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 22/81 (27%)
Query: 33 CPPPISSCCGSSSGGCG--CCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGS 90
CP +CC C CC GCC S C S C GSG G GS
Sbjct: 4 CPGDCFTCCTQEQNCCEECCCQPGCCGCCGS--------CCGCGGSGCGGSGCGGSCCGS 55
Query: 91 GCCS------------GGGCC 99
CC GGGCC
Sbjct: 56 SCCGSGCGGCGGCGGCGGGCC 76
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 49 GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGS---GSGQQSGGSGC---CSGGGCC 99
GCC + CC C +P C GS G GGSGC C G CC
Sbjct: 2 GCCPGDCFTCCTQEQNCCEECCCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCC 58
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 51.2 bits (121), Expect = 2e-07
Identities = 24/39 (61%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 1 MSCQQNQ--QQCQPPPKCPIPKYPPKC-PSKCASSCPPP 36
MS QQ Q Q CQPPP CP PK P C P KC CPPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 9/33 (27%)
Query: 12 PPPKCPIP--------KYPPKCPS-KCASSCPP 35
PPPKCP P KYPP PS C S PP
Sbjct: 37 PPPKCPQPCPPQQCQQKYPPVTPSPPCQSKYPP 69
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 51.2 bits (121), Expect = 2e-07
Identities = 24/39 (61%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 1 MSCQQNQ--QQCQPPPKCPIPKYPPKC-PSKCASSCPPP 36
MS QQ Q Q CQPPP CP PK P C P KC CPPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 9/33 (27%)
Query: 12 PPPKCPIP--------KYPPKCPS-KCASSCPP 35
PPPKCP P KYPP PS C PP
Sbjct: 37 PPPKCPQPCPPQQCQQKYPPVTPSPPCQPKYPP 69
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 51.2 bits (121), Expect = 2e-07
Identities = 24/39 (61%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 1 MSCQQNQ--QQCQPPPKCPIPKYPPKC-PSKCASSCPPP 36
MS QQ Q Q CQPPP CP PK P C P KC CPPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 12 PPPKCPIPKYPPKCPSKCASSCP-PPISSCCGSSS 45
PPPKCP P P +C KC P PP C S
Sbjct: 37 PPPKCPQPCPPQQCQQKCPPVTPSPPCQPKCPPKS 71
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 4 QQNQQQCQPPPKCPIPKYPPKCPSK 28
QQ QQ+C PP P P PKCP K
Sbjct: 48 QQCQQKC--PPVTPSPPCQPKCPPK 70
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 50.4 bits (119), Expect = 3e-07
Identities = 34/83 (40%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 23 PKCPSKCASSCPPPIS--SC--CGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRP--KSS 76
P C K C P S SC CG S GGCG C S GGC +S+C +P SS
Sbjct: 38 PICCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSSKGGC--GSCGCSQSNCCKPCCSSS 95
Query: 77 NCYGSGSGQQSGGSGCCSGGGCC 99
C GS Q S CC CC
Sbjct: 96 GC-GSFCCQSSCSKPCCCQSSCC 117
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 25 CPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSG 84
C ++ C P CC SS G CC S C +S C +P C S
Sbjct: 80 CGCSQSNCCKP----CCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKP---CCCQSSCC 132
Query: 85 QQSGGSGCCSGGGCC 99
Q S CC CC
Sbjct: 133 QSSCFKPCCCQSSCC 147
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/75 (36%), Positives = 30/75 (40%), Gaps = 16/75 (21%)
Query: 40 CCGSSSG---GCGCCSSEGGGC----------CLSHHRHHRSHCHRPKSSNCYGSGS-GQ 85
CCG S G GCG C S GGC C + C + +C GS G
Sbjct: 3 CCGCSGGCGSGCGGCGSGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGG 62
Query: 86 QSGGSGCC--SGGGC 98
GG G C S GGC
Sbjct: 63 SKGGCGSCGSSKGGC 77
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 21/55 (38%)
Query: 46 GGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCS-GGGCC 99
G CGC GGC S C G GSG GSGC G CC
Sbjct: 2 GCCGC----SGGC----------------GSGCGGCGSGSGGCGSGCGGCGSSCC 36
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 50.1 bits (118), Expect = 4e-07
Identities = 27/47 (57%), Positives = 27/47 (57%), Gaps = 12/47 (25%)
Query: 1 MSCQQNQ--QQCQPPPKCPIPKY-----PPKC-----PSKCASSCPP 35
MS QQ Q Q CQPPP CP PK PPKC PSKC SCPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKCPQSCPP 47
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 4 QQNQQQCQPPPKCPIPKYPPKCPSK 28
QQ QQ+C PP P P PKCP K
Sbjct: 48 QQCQQKC--PPVTPSPPCQPKCPPK 70
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 48.1 bits (113), Expect = 1e-06
Identities = 23/39 (58%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 1 MSCQQNQ--QQCQPPPKCPIPKYPPKC-PSKCASSCPPP 36
MS QQ Q Q CQPPP CP PK P C P KC CP P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSP 39
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 8 QQCQP--PPKCPIPKYPPKCPSK 28
QQCQ PP P P PKCP K
Sbjct: 48 QQCQQKYPPVTPSPPCQPKCPPK 70
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 47.8 bits (112), Expect = 2e-06
Identities = 40/118 (33%), Positives = 46/118 (38%), Gaps = 21/118 (17%)
Query: 2 SCQQNQQQCQPPPKCPIPKYPPKC---PSKCASSCPPPISSCCGSSSGGCG--------- 49
SC + C P P+ P C P+ SSC CG S GGCG
Sbjct: 23 SCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSC 82
Query: 50 ----CCSSE-GGGCC-LSHHRHHRSHCHRPK---SSNCYGSGSGQQSGGSGCCSGGGC 98
CCSS G CC S + + S C K SS+ GS Q S CCS GC
Sbjct: 83 CKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGC 140
Score = 40.0 bits (92), Expect = 4e-04
Identities = 36/106 (33%), Positives = 38/106 (35%), Gaps = 27/106 (25%)
Query: 2 SCQQNQQQCQPPPKCPIPKYPPKCPSKCAS-SCPPPISS-------CCGSSSGGCGCCSS 53
SC +Q C P C C S C SC P S CC SS G CC S
Sbjct: 74 SCGCSQCSCCKPCCCS-----SGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQS 128
Query: 54 EGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
CC + C SS C GS Q S CCS CC
Sbjct: 129 ---SCC-------KPCC---SSSGC-GSSCCQSSCCKPCCSQSRCC 160
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/76 (34%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 25 CPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRP--KSSNCYGSG 82
C C SSC S CGS GC C G CC + C P S+C G
Sbjct: 6 CSGGCGSSC-GGCDSSCGSCGSGCRGC---GPSCCAPVYCCKPVCCCVPACSCSSCGKRG 61
Query: 83 SGQQSGGSGCCSGGGC 98
G G G C GC
Sbjct: 62 CGSCGGSKGGCGSCGC 77
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 20/60 (33%)
Query: 40 CCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
CCG S GGCG S GGC S+C GSG + G CC+ CC
Sbjct: 3 CCGCS-GGCG---SSCGGC----------------DSSCGSCGSGCRGCGPSCCAPVYCC 42
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 27 SKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPK 74
S C SSC P CC SS G CC S C S R C++ K
Sbjct: 124 SCCQSSCCKP---CCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCK 168
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 47.4 bits (111), Expect = 2e-06
Identities = 38/101 (37%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
Query: 2 SCQQNQQQCQPPPKCPIPKYPPKCPSKCA-SSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
SC +Q C P C C S C SSC P CC SS G CC S CC
Sbjct: 193 SCGCSQCSCCKPCCCS-----SGCGSSCCQSSCCKP---CCSSSGCGSSCCQSS---CCK 241
Query: 61 SHHRHHRSHCHRP--KSSNCYGSGSGQQSGGSGCCSGGGCC 99
+ +S C +P SS C GS Q S + CCS CC
Sbjct: 242 PYCC--QSSCCKPCCSSSGC-GSSCCQSSCCNPCCSQSSCC 279
Score = 42.0 bits (97), Expect = 1e-04
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%)
Query: 29 CASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSG 88
C+ C S CG GCG C S GGC S C G GSG
Sbjct: 6 CSGGC----GSGCGGCGSGCGGCGSGCGGC----------------GSGCGGCGSGCGGC 45
Query: 89 GSGCCSGGGCC 99
GS CC CC
Sbjct: 46 GSSCCVPICCC 56
Score = 41.6 bits (96), Expect = 1e-04
Identities = 26/64 (40%), Positives = 26/64 (40%), Gaps = 20/64 (31%)
Query: 40 CCGSSSG---GCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCS-G 95
CCG S G GCG C S GGC S C G GSG GSGC G
Sbjct: 3 CCGCSGGCGSGCGGCGSGCGGC----------------GSGCGGCGSGCGGCGSGCGGCG 46
Query: 96 GGCC 99
CC
Sbjct: 47 SSCC 50
Score = 41.6 bits (96), Expect = 1e-04
Identities = 33/106 (31%), Positives = 35/106 (33%), Gaps = 26/106 (24%)
Query: 10 CQPPPKCPIPKYPPKCPSKCASS------CPPPISSC--CGSSSGGCGCCSSEGGGCCLS 61
C P C +P C S C C CG S GGCG C GGC
Sbjct: 55 CCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGC--- 111
Query: 62 HHRHHRSHCHRPKS--SNCYGS-----GSGQQSGGSGCCSG--GGC 98
C K +C GS G GG G C G GGC
Sbjct: 112 ------GSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGC 151
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/86 (36%), Positives = 34/86 (39%), Gaps = 12/86 (13%)
Query: 25 CPSKCASSCPPPISSCCGSSSG------GCGCCSSEGGGC---CLSHHRHHRSHCHRPKS 75
C C S C S C G SG GCG C S GGC C + C +
Sbjct: 6 CSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPA 65
Query: 76 SNCYGSGS-GQQSGGSGCCSG--GGC 98
+C GS G GG G C G GGC
Sbjct: 66 CSCSSCGSCGGSKGGYGSCGGSKGGC 91
Score = 40.0 bits (92), Expect = 4e-04
Identities = 32/83 (38%), Positives = 32/83 (38%), Gaps = 20/83 (24%)
Query: 23 PKCPSKCASSCPPPIS--SC--CGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNC 78
P C K C P S SC CG S GG G C GGC C K
Sbjct: 52 PICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCV---------SCGGSKG--- 99
Query: 79 YGSGS-GQQSGGSGCCSG--GGC 98
G GS G GG G C G GGC
Sbjct: 100 -GCGSCGGSKGGCGSCGGSKGGC 121
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 21/71 (29%)
Query: 32 SCPPPISSC--CGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGS--GSGQQS 87
SC C CG S GGCG C GGC +C GS G G
Sbjct: 143 SCGGSKGGCVSCGGSKGGCGSCGGSKGGC-----------------GSCGGSKGGCGSCG 185
Query: 88 GGSGCCSGGGC 98
G G C GC
Sbjct: 186 GSKGGCGSCGC 196
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/69 (37%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 32 SCPPPISSC--CGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGG 89
SC C CG S GGCG C CC + C SS C GS Q S
Sbjct: 173 SCGGSKGGCGSCGGSKGGCGSCGCSQCSCC-------KPCC---CSSGC-GSSCCQSSCC 221
Query: 90 SGCCSGGGC 98
CCS GC
Sbjct: 222 KPCCSSSGC 230
Score = 32.7 bits (73), Expect = 0.064
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 19/69 (27%)
Query: 39 SCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKS--SNCYGS-----GSGQQSGGSG 91
SC GS GCG C GGC C K +C GS G GG G
Sbjct: 113 SCGGSKG-GCGSCGGSKGGCV---------SCGGSKGGCGSCGGSKGGCVSCGGSKGGCG 162
Query: 92 CCSG--GGC 98
C G GGC
Sbjct: 163 SCGGSKGGC 171
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 47.0 bits (110), Expect = 3e-06
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 14 PKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSE--GGGCCLSHHRHHRSHCH 71
P CP+ P C S C SSC P SCC SS CC+S CC+ ++ C
Sbjct: 66 PCCPVTCEPSPCQSGCTSSCTP---SCCQQSSCQLACCASSPCQQACCVP--VCCKTVCC 120
Query: 72 RPKS--SNCYGSGS--GQQSGGSGCCSGGGC 98
+P S C G S Q S S CC+ C
Sbjct: 121 KPVCCVSVCCGDSSCCQQSSCQSACCTSSPC 151
Score = 41.2 bits (95), Expect = 2e-04
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 3 CQQNQ-QQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSE--GGGCC 59
CQQ+ C P C P C S C SSC P SCC SS CC+S CC
Sbjct: 173 CQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTP---SCCQQSSCQPTCCTSSPCQQACC 229
Query: 60 LSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGC 98
+ C P S S Q S CC+ C
Sbjct: 230 VP--VCCVPVCCVPTCSEDSSSCCQQSSCQPACCTSSPC 266
Score = 37.0 bits (84), Expect = 0.003
Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 19/103 (18%)
Query: 3 CQQN--QQQCQPPPKCPIPKYPPKC--PSKCASSCPPPISSCCGSSSGGCGCCSSE--GG 56
CQQ+ Q C C P C P C +C SSCC SS CC+S
Sbjct: 209 CQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVPTCSEDSSSCCQQSSCQPACCTSSPCQH 268
Query: 57 GCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGCC 99
CC+ C +S C QQS C CC
Sbjct: 269 ACCV-------PVCSGASTSCC------QQSSCQPACCTASCC 298
Score = 35.0 bits (79), Expect = 0.013
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 17/93 (18%)
Query: 2 SCQQNQQQCQPP---PKC--PIPKYPPKCPSKCASSCPPPISSCCGSSSGGC--GCCSSE 54
SC Q Q CQP C P C C S+C P+ S CG+S+ C CC +
Sbjct: 281 SCCQ-QSSCQPACCTASCCRPSSSVSLLCHPVCKSTCCVPVPS-CGASASSCQPSCCRT- 337
Query: 55 GGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQS 87
C+S R C RP CY SGQ+S
Sbjct: 338 --ASCVS--LLCRPMCSRPA---CYSLCSGQKS 363
Score = 32.7 bits (73), Expect = 0.064
Identities = 31/94 (32%), Positives = 34/94 (36%), Gaps = 14/94 (14%)
Query: 7 QQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSE--GGGCCLSHHR 64
QQ C P C P C C S C SSCC SS CC+S CC+
Sbjct: 106 QQACCVPVCCKTVCCKPVC---CVSVCCGD-SSCCQQSSCQSACCTSSPCQQACCV---- 157
Query: 65 HHRSHCHRPKSSNCYGSGSGQQSGGSGCCSGGGC 98
C +P S S QQS C S C
Sbjct: 158 ---PVCCKPVCSG-ISSSCCQQSSCVSCVSSPCC 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.515
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,949,375
Number of Sequences: 37866
Number of extensions: 448612
Number of successful extensions: 6444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 312
Number of HSP's that attempted gapping in prelim test: 3808
Number of HSP's gapped (non-prelim): 1802
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.