Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 29789401
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo
sapiens]
(375 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo s... 762 0.0
gi|223890185 ubiquitin-conjugating enzyme E2Q 2 isoform 2 [Homo ... 638 0.0
gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens] 551 e-157
gi|223555979 probable ubiquitin-conjugating enzyme E2 FLJ25076 [... 168 6e-42
gi|239756416 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|169208393 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa... 47 2e-05
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 47 4e-05
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 43 5e-04
gi|19923475 tRNA methyltransferase 6 [Homo sapiens] 42 7e-04
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 42 9e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 0.002
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 40 0.004
gi|22749303 hypothetical protein LOC196477 [Homo sapiens] 40 0.004
gi|21735415 centromere protein B [Homo sapiens] 39 0.008
gi|17975763 myelin transcription factor 1 [Homo sapiens] 39 0.008
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 39 0.008
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 39 0.008
gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform... 39 0.008
gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform ... 39 0.008
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 38 0.013
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 38 0.013
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 38 0.013
gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens] 38 0.013
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.017
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 38 0.017
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 38 0.017
gi|87298939 hypothetical protein LOC131831 [Homo sapiens] 37 0.022
gi|31543091 MAK16 homolog [Homo sapiens] 37 0.022
gi|46276863 parathymosin [Homo sapiens] 37 0.022
>gi|29789401 ubiquitin-conjugating enzyme E2Q 2 isoform 1 [Homo
sapiens]
Length = 375
Score = 762 bits (1967), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 60
MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT
Sbjct: 1 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 60
Query: 61 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 120
ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM
Sbjct: 61 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 120
Query: 121 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 180
LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL
Sbjct: 121 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 180
Query: 181 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 240
AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH
Sbjct: 181 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 240
Query: 241 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG 300
VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG
Sbjct: 241 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG 300
Query: 301 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 360
GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ
Sbjct: 301 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 360
Query: 361 IHEKNGWYTPPKEDG 375
IHEKNGWYTPPKEDG
Sbjct: 361 IHEKNGWYTPPKEDG 375
>gi|223890185 ubiquitin-conjugating enzyme E2Q 2 isoform 2 [Homo
sapiens]
Length = 359
Score = 638 bits (1646), Expect = 0.0
Identities = 319/336 (94%), Positives = 320/336 (95%), Gaps = 10/336 (2%)
Query: 50 PPPLTLHCNITE----------SYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQL 99
PP L C + E SYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQL
Sbjct: 24 PPGLAARCCVLERSIVPSLRQESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQL 83
Query: 100 KWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEM 159
KWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEM
Sbjct: 84 KWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEM 143
Query: 160 KEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRS 219
KEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRS
Sbjct: 144 KEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRS 203
Query: 220 QSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 279
QSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP
Sbjct: 204 QSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 263
Query: 280 FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQF 339
FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQF
Sbjct: 264 FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQF 323
Query: 340 GANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 375
GANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG
Sbjct: 324 GANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 359
>gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens]
Length = 422
Score = 551 bits (1419), Expect = e-157
Identities = 286/386 (74%), Positives = 319/386 (82%), Gaps = 20/386 (5%)
Query: 6 LKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGS--------PHSLPP------ 51
L+ ELK L SIF + HERFRI S LDEL C+FL+ G PH LPP
Sbjct: 41 LRRELKLLESIFHRGHERFRIASACLDELSCEFLLAGAGGAGAGAAPGPH-LPPRGSVPG 99
Query: 52 -PLTLHCNITESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNN-LLRQQLKWLICELCSL 109
P+ +HCNITESYP+ PIW V+S+DPNL +VLERL D K N LL Q LK +I +LC L
Sbjct: 100 DPVRIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKL 159
Query: 110 YNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKK 169
YNLP+H DVEMLDQPLP Q T E+V+SE+E+EE M ED EDLDHYEMKEEEP GKK
Sbjct: 160 YNLPQHPDVEMLDQPLPAEQC-TQEDVSSEDEDEE--MPEDTEDLDHYEMKEEEPAEGKK 216
Query: 170 SEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSV 229
SED+GI KENLAILEKI+K QRQD+LNGAVSGSVQA+DRLMKELRDIYRSQS+K G Y+V
Sbjct: 217 SEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMKELRDIYRSQSFKGGNYAV 276
Query: 230 ELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVL 289
EL+NDSLYDW+VKL KVD DS LH+DLQILKEKEG ++ILLNFSFKDNFPFDPPFVRVV
Sbjct: 277 ELVNDSLYDWNVKLLKVDQDSALHNDLQILKEKEGADFILLNFSFKDNFPFDPPFVRVVS 336
Query: 290 PVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLA 349
PVLSGGYVLGGGA+CMELLTKQGWSSAYSIESVIMQI+ATLVKGKARVQFGANK+QY+L
Sbjct: 337 PVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKSQYSLT 396
Query: 350 RAQQSYNSIVQIHEKNGWYTPPKEDG 375
RAQQSY S+VQIHEKNGWYTPPKEDG
Sbjct: 397 RAQQSYKSLVQIHEKNGWYTPPKEDG 422
>gi|223555979 probable ubiquitin-conjugating enzyme E2 FLJ25076
[Homo sapiens]
Length = 161
Score = 168 bits (426), Expect = 6e-42
Identities = 85/168 (50%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Query: 210 MKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYIL 269
MKEL+DI R SVEL+++SL+DW+VKL +VD DS L D++ + E+IL
Sbjct: 1 MKELQDIARLSDR---FISVELVDESLFDWNVKLHQVDKDSVLWQDMK----ETNTEFIL 53
Query: 270 LNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINAT 329
LN +F DNFPF PPF+RV+ P L GYVL GGA+CMELLT +GWSSAY++E+V+ Q A+
Sbjct: 54 LNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAAS 113
Query: 330 LVKGKARV--QFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG 375
LVKG+ R+ + G +K ++ A+ ++ S+V+ HEK GW TPP DG
Sbjct: 114 LVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG 161
>gi|239756416 PREDICTED: hypothetical protein [Homo sapiens]
Length = 97
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 61 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLK 100
ES S SPI FVDS++PNLTSVLE LEDTKNN+ ++++ K
Sbjct: 45 ESSSSFSPICFVDSDEPNLTSVLEHLEDTKNNHSVKREAK 84
>gi|169208393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 97
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 61 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLK 100
ES S SPI FVDS++PNLTSVLE LEDTKNN+ ++++ K
Sbjct: 45 ESSSSFSPICFVDSDEPNLTSVLEHLEDTKNNHSVKREAK 84
>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
sapiens]
Length = 157
Score = 47.4 bits (111), Expect = 2e-05
Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 205 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEG 264
A R+ +E +++ +S+ V+L++++ + ++ PD+P EG
Sbjct: 5 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAG-PPDTPY----------EG 53
Query: 265 IEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIM 324
Y L + +PF+PP VR + + GA+C+++L K W++A ++ +V++
Sbjct: 54 GRY-QLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-KDQWAAAMTLRTVLL 111
Query: 325 QINATLVKGK---ARVQFGANKNQYNLARAQQSYN 356
+ A L + + AN+N +A + +S++
Sbjct: 112 SLQALLAAAEPDDPQDAVVANQNAVIVALSSKSWD 146
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 46.6 bits (109), Expect = 4e-05
Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 205 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEG 264
A R+ +E +++ +S+ V+L++++ + ++ PD+P EG
Sbjct: 5 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAG-PPDTPY----------EG 53
Query: 265 IEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIM 324
Y L + +PF+PP VR + + GA+C+++L K W++A ++ +V++
Sbjct: 54 GRY-QLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-KDQWAAAMTLRTVLL 111
Query: 325 QINATL 330
+ A L
Sbjct: 112 SLQALL 117
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 42.7 bits (99), Expect = 5e-04
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQD 193
EE EE+E+++E ED+ED + E +EEE +++ED + N I++ T++ D
Sbjct: 132 EEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQ---DTEKDD 188
Query: 194 HLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELIN--DSLYDWHVKLQKVDPDSP 251
+ N + + + L I +Y+ S N +SL D K + + S
Sbjct: 189 NNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSE 248
Query: 252 LHSDLQILKEKEGIEYILL 270
L DL +E ++ + L
Sbjct: 249 LSLDLDSDVVRETVDSLKL 267
Score = 33.5 bits (75), Expect = 0.32
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 133 TEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKEN 179
TE++ +EE+E EE +ED ++ + ++EE G + E+E IE+E+
Sbjct: 96 TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEE---GDREEEEEIEEED 139
>gi|19923475 tRNA methyltransferase 6 [Homo sapiens]
Length = 497
Score = 42.4 bits (98), Expect = 7e-04
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 114 KHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPIS----GKK 169
K L E D L NGT EE + E+E E+ MAE E + + E IS K
Sbjct: 273 KMLSSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKG 332
Query: 170 SEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSV 229
++ G +K+ + ++ ++ QR+ HL A S + +D L I S+ + T +
Sbjct: 333 PKERGSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGL------IVASRFHPTPLLLS 386
Query: 230 ELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVL 289
L D + + PL L+E+ G+ + L+ ++ N+ P L
Sbjct: 387 LL--DFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKL 444
Query: 290 PVL-SGGYVLGGGALCMELL 308
+ GGY+L G + M+ L
Sbjct: 445 LMSGGGGYLLSGFTVAMDNL 464
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 42.0 bits (97), Expect = 9e-04
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 123 QPLPTGQNGTTEEVTS-EEEEEEEEMAEDIEDLDHYEMKEE----EPISGKKSEDEGIEK 177
Q LP + EE EEEE+EEE ED E+ + E KEE E GKK E+E +E+
Sbjct: 114 QGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEE 173
Query: 178 ENLAILEKIRKTQ 190
E I +I++TQ
Sbjct: 174 E---IDTEIQRTQ 183
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 139 EEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQD 193
E EEEEEE+ E+ ++ + E +EEE +K EDE E++ +E+ + + D
Sbjct: 122 EVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEID 176
Score = 30.8 bits (68), Expect = 2.1
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 139 EEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGA 198
EEEE EEE E++E+ + E KEE+ +K E++ ++E EK K ++ +
Sbjct: 119 EEEEVEEE-EEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEE---EEKEGKKMEEEKVEEE 174
Query: 199 VSGSVQASDRL 209
+ +Q + L
Sbjct: 175 IDTEIQRTQYL 185
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
EE EEEEEEEE E+ ED + E EEE ++ E+E E+E
Sbjct: 890 EEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Score = 36.6 bits (83), Expect = 0.038
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHY---EMKEEEPISGKKSEDEG-IEKE 178
EE EEEEEEE+ E+ ED + Y E +EEE + E+EG +E+E
Sbjct: 897 EEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEE 945
Score = 34.3 bits (77), Expect = 0.19
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 180
EE EEEEEEEE E+ + + E++EEE ++ E+E E E+L
Sbjct: 917 EEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDL 963
Score = 33.1 bits (74), Expect = 0.42
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLD 155
+ G EE EE+EEEEE E++EDL+
Sbjct: 938 EEGELEEEEEEEDEEEEEELEEVEDLE 964
Score = 32.7 bits (73), Expect = 0.55
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQD 193
E+ EEE+EEE E+ E+ + +E + EE + E+E ++E LE++ +D
Sbjct: 908 EDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEV-----ED 962
Query: 194 HLNGAVSGSVQ 204
G G V+
Sbjct: 963 LEFGTAGGEVE 973
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 39.7 bits (91), Expect = 0.004
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 128 GQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDE 173
G + E+ EE +E+ ++ ED ED D E EEE +SG++ EDE
Sbjct: 166 GLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDE 211
Score = 32.0 bits (71), Expect = 0.93
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 135 EVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDH 194
+V +EE+E+EE + ED+ E ++EE + + +DE ++E L E+ +K +R+
Sbjct: 184 QVVEDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEE-DEEELGEEERGQKRKREPE 242
Query: 195 LNG 197
G
Sbjct: 243 DEG 245
Score = 29.6 bits (65), Expect = 4.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 129 QNGTTEEVTSEEEEEEE--EMAEDIEDLDHYEMKEEEPISGKKSEDE 173
+ G E+V+ EEEE+EE E ++ D E+ EEE +K E E
Sbjct: 196 EEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEERGQKRKREPE 242
>gi|22749303 hypothetical protein LOC196477 [Homo sapiens]
Length = 406
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 114 KHLDVEMLDQPLPTGQNGTTEE--VTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSE 171
K+ D E DQ + + + EE V EEEE E+E E++E+ ++ E EEE + E
Sbjct: 283 KNDDEEEYDQEVCDAKEASEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEELEE 342
Query: 172 DEGIEKEN 179
+E + +EN
Sbjct: 343 EEEVLEEN 350
Score = 32.3 bits (72), Expect = 0.71
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPI--SGKKSEDEGIEKENLAILEKIRKTQR 191
+E + EEEE E+E E++ED + E++E E + ++ E+E +E+E +LE+ +
Sbjct: 298 KEASEEEEEVEDE-EEEVEDEEEEEVEEAEYVEEGEEELEEEELEEEE-EVLEENEQRGE 355
Query: 192 QDHL 195
+ HL
Sbjct: 356 EFHL 359
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 128 GQNGT-TEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKI 186
G N T T + SE EEEEEE E+ E+ E +EEE G++ E+EG E E L E++
Sbjct: 392 GPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEE---GEEEEEEGGEGEELGEEEEV 448
Query: 187 RK 188
+
Sbjct: 449 EE 450
Score = 34.7 bits (78), Expect = 0.14
Identities = 22/55 (40%), Positives = 27/55 (49%)
Query: 124 PLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
P T E EEEEEEEE E+ E + E EEE G + E+ G E+E
Sbjct: 393 PNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEE 447
Score = 32.3 bits (72), Expect = 0.71
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKK-SEDEGIEKE 178
EE EEEEEEEE E E+ + E +EEE G++ E+E +E+E
Sbjct: 407 EEEEEEEEEEEEE-GEGEEEEEEGEEEEEEGGEGEELGEEEEVEEE 451
Score = 32.3 bits (72), Expect = 0.71
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
Query: 131 GTTEEVTSEEEEE---------EEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLA 181
G EE EEEEE EEE E+ D+D E +EE+ ++S EG+E E+ A
Sbjct: 422 GEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEED----EESSSEGLEAEDWA 477
Score = 32.0 bits (71), Expect = 0.93
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKEN 179
+ G EE E EEEEEE E E + E++EE + + E+E E +
Sbjct: 418 EEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSS 468
Score = 30.8 bits (68), Expect = 2.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPI 165
+ G + SEEE++EEE ED +D D E +E P+
Sbjct: 505 EGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVPV 541
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 38.9 bits (89), Expect = 0.008
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
EE EEEEEEEE ED E+ + E +EEE ++ E+E E+E
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 37.7 bits (86), Expect = 0.017
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKI------- 186
E+ EEEEEEEE E+ E+ + E +EEE ++ E+E E+E A + I
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSH 319
Query: 187 RKTQRQDHLNGAVSGSVQASDRLMKELR 214
Q+ L G S S + ++ E+R
Sbjct: 320 TSAQKAPELRGPESPSPKPEYSVIVEVR 347
Score = 35.8 bits (81), Expect = 0.064
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 133 TEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
+ E EEEEEEEE E+ E+ + E +EEE ++ E+E E+E
Sbjct: 256 SHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Score = 35.8 bits (81), Expect = 0.064
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
EE EEEEEEEE ++ E+ + E +EEE ++ E+E E+E
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 35.4 bits (80), Expect = 0.084
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 136 VTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
++ EEE+EEEE E+ E+ D E +EEE ++ E+E E+E
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Score = 34.7 bits (78), Expect = 0.14
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
Q G +EEEEEEE E+ ++ + E +EEE ++ E+E E+E
Sbjct: 251 QKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Score = 30.8 bits (68), Expect = 2.1
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 14/59 (23%)
Query: 134 EEVTSEE--------------EEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
E+ SEE EEEEEE E+ ED + E +EEE ++ E+E E+E
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 299
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRK 188
Q ++ E S EEEEEE E+ E+ + E +EE+ KS +G +KIRK
Sbjct: 1393 QEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKG--------RKKIRK 1444
Query: 189 TQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE 230
+ D L +++ + K + + R + + +E
Sbjct: 1445 ILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIE 1486
Score = 29.3 bits (64), Expect = 6.0
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 23/164 (14%)
Query: 87 EDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEE 146
E++ N +L+ ++ L+ E L P+ + P + T VTS +EE E
Sbjct: 594 ENSDNEHLVENEVS-LLLEESDLRRSPRV-------KTTPLRRPTETNPVTSNSDEECNE 645
Query: 147 MAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQAS 206
++ + L K+++ + S D I+ L K ++++ D + S
Sbjct: 646 TVKEKQKLSVPVRKKDK----RNSSDSAIDNPKPNKLPKSKQSETVDQNSD--------S 693
Query: 207 DRLMKELRDIYR---SQSYKTGIYSVELINDSLYDWHVKLQKVD 247
D ++ L+++ R S S T I + + +LYD + K D
Sbjct: 694 DEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDD 737
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRK 188
Q ++ E S EEEEEE E+ E+ + E +EE+ KS +G +KIRK
Sbjct: 1431 QEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKG--------RKKIRK 1482
Query: 189 TQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE 230
+ D L +++ + K + + R + + +E
Sbjct: 1483 ILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIE 1524
Score = 29.3 bits (64), Expect = 6.0
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 23/164 (14%)
Query: 87 EDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEE 146
E++ N +L+ ++ L+ E L P+ + P + T VTS +EE E
Sbjct: 632 ENSDNEHLVENEVS-LLLEESDLRRSPRV-------KTTPLRRPTETNPVTSNSDEECNE 683
Query: 147 MAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQAS 206
++ + L K+++ + S D I+ L K ++++ D + S
Sbjct: 684 TVKEKQKLSVPVRKKDK----RNSSDSAIDNPKPNKLPKSKQSETVDQNSD--------S 731
Query: 207 DRLMKELRDIYR---SQSYKTGIYSVELINDSLYDWHVKLQKVD 247
D ++ L+++ R S S T I + + +LYD + K D
Sbjct: 732 DEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDD 775
>gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform 2
[Homo sapiens]
Length = 151
Score = 38.9 bits (89), Expect = 0.008
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 263 EGIEYILLNFSFKDNFPFDPP---FVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSI 319
EG ++ LL F F +PFD P F +PV +V G +C+ +LT + WS A S+
Sbjct: 50 EGEKFQLL-FKFSSRYPFDSPQVMFTGENIPV--HPHVYSNGHICLSILT-EDWSPALSV 105
Query: 320 ESVIMQINATLVKGKAR 336
+SV + I + L K +
Sbjct: 106 QSVCLSIISMLSSCKEK 122
>gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform 1
[Homo sapiens]
Length = 162
Score = 38.9 bits (89), Expect = 0.008
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 263 EGIEYILLNFSFKDNFPFDPP---FVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSI 319
EG ++ LL F F +PFD P F +PV +V G +C+ +LT + WS A S+
Sbjct: 61 EGEKFQLL-FKFSSRYPFDSPQVMFTGENIPV--HPHVYSNGHICLSILT-EDWSPALSV 116
Query: 320 ESVIMQINATLVKGKAR 336
+SV + I + L K +
Sbjct: 117 QSVCLSIISMLSSCKEK 133
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 38.1 bits (87), Expect = 0.013
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 135 EVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEK 185
EV +EEEEEE+E E+ E+ D E +E+E + ++ EDE E+E A EK
Sbjct: 1869 EVFTEEEEEEDE-EEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEK 1918
Score = 33.5 bits (75), Expect = 0.32
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 118 VEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDL----DHYEMKEEEPISGKKSEDE 173
++M++ + T + +E EEE+EEE ED E+ + E +EEE G+K +E
Sbjct: 1863 LKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEK--EE 1920
Query: 174 GIEK 177
G+E+
Sbjct: 1921 GLEE 1924
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 38.1 bits (87), Expect = 0.013
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 135 EVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEK 185
EV +EEEEEE+E E+ E+ D E +E+E + ++ EDE E+E A EK
Sbjct: 1869 EVFTEEEEEEDE-EEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEK 1918
Score = 33.5 bits (75), Expect = 0.32
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 118 VEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDL----DHYEMKEEEPISGKKSEDE 173
++M++ + T + +E EEE+EEE ED E+ + E +EEE G+K +E
Sbjct: 1863 LKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEK--EE 1920
Query: 174 GIEK 177
G+E+
Sbjct: 1921 GLEE 1924
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 38.1 bits (87), Expect = 0.013
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 127 TGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSE-DEGIEKENLAILEK 185
+G N ++ EEEEEEE+ +D ED + E E++ G + E DE N + L +
Sbjct: 2422 SGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDMNASPLVR 2481
Query: 186 IRKTQRQDHL 195
+ R+D L
Sbjct: 2482 FERFDREDDL 2491
Score = 33.1 bits (74), Expect = 0.42
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 65 SSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHL----DVEM 120
SS P+ S + L R + T + +K L+ E+C+L PK++ ++
Sbjct: 648 SSDPLGDTASNLGSAVDELMRHQPTLKTDATTAIIK-LLEEICNLGRDPKYICQKPSIQK 706
Query: 121 LDQPL---PTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEP 164
D P N EE +SE+EEEEE A ++ + + E EP
Sbjct: 707 ADGTATAPPPRSNHAAEEASSEDEEEEEVQA--MQSFNSTQQNETEP 751
>gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens]
Length = 1720
Score = 38.1 bits (87), Expect = 0.013
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 129 QNGTTEE---VTSEEEEEEEEMAEDI-------EDLDHYEMKEEEPISGKKSEDEGIEKE 178
Q G EE + E EE + A D E++D YE +EEE G++++DE +++E
Sbjct: 1390 QEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVD-YESEEEEEREGEENDDEDMQEE 1448
Query: 179 NLAILEKIRKTQRQD 193
E RKTQ QD
Sbjct: 1449 RNPHREGARKTQEQD 1463
Score = 31.2 bits (69), Expect = 1.6
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDE------GIEKENL--AILEK 185
EEV E EEEEE E+ +D D E + +K++++ G E++ A+L +
Sbjct: 1423 EEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQ 1482
Query: 186 IRKTQRQDHLNGAVSGSVQASDRLMKELRDIY 217
RK G +A +R ++ +R+I+
Sbjct: 1483 PRKPTHSQEPQGP-----EAMERRVQAVREIH 1509
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 37.7 bits (86), Expect = 0.017
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 119 EMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYE--MKEEEPISGKKSEDEGIE 176
+ML Q T Q T E + E+EE+M E E + E M+E+E GK+ E +
Sbjct: 277 QMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQ 336
Query: 177 KENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQ 220
KE + E+ + +Q+ G +Q + +++ + R Q
Sbjct: 337 KEQM--WEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQ 378
Score = 32.7 bits (73), Expect = 0.55
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 128 GQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIR 187
GQ G EE E+EE+ ++ E + + + K+EE + ++ + + E++ E++R
Sbjct: 199 GQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMR 258
Query: 188 KTQRQ 192
K + Q
Sbjct: 259 KQEEQ 263
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/130 (17%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 134 EEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKTQRQD 193
EE E+EE+ ++ E ++ + K+EE + + ++E + ++ +L++ +T+ Q+
Sbjct: 233 EEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQM---REQEEQMREQEEQMLKQKEQTE-QE 288
Query: 194 HLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLH 253
G ++ + M+E + R Q + ++ W K Q + +
Sbjct: 289 EQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMW 348
Query: 254 SDLQILKEKE 263
+ + E+E
Sbjct: 349 KQEEQMGEQE 358
Score = 30.0 bits (66), Expect = 3.5
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYE--MKEEEPISGKKSEDEGIEKENLAILEKI 186
Q G E + E+EE+M E E + E M E+E K+ E G ++E + E+
Sbjct: 190 QEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEE- 248
Query: 187 RKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKT 224
+ Q+Q+ ++ + M+E + Q +T
Sbjct: 249 -QVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQT 285
Score = 28.9 bits (63), Expect = 7.9
Identities = 18/92 (19%), Positives = 39/92 (42%)
Query: 129 QNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRK 188
Q G E + E+E +M E E + E + ++ ++E + K+ + E+ +
Sbjct: 183 QEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQ 242
Query: 189 TQRQDHLNGAVSGSVQASDRLMKELRDIYRSQ 220
Q+Q+ ++ + M+E + R Q
Sbjct: 243 VQKQEEQVQKQEEQMRKQEEQMREQEEQMREQ 274
Score = 28.9 bits (63), Expect = 7.9
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 129 QNGTTEEVTSEEEEE----EEEMAEDIEDLDHYE--MKEEEPISGKKSEDEGIEKENLAI 182
Q G EE ++EE+ EE+M + E + E M+++E G++ E G +KE +
Sbjct: 353 QMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMRE 412
Query: 183 LEKIRKTQRQ 192
E+ Q++
Sbjct: 413 QEEQMGEQKE 422
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 37.7 bits (86), Expect = 0.017
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 119 EMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEG 174
E +D + TE++ SEEEEEEEE E+ E+ + E +EE+ SG +S+ G
Sbjct: 281 ERVDSDSKSEVEALTEQL-SEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSG 335
Score = 32.7 bits (73), Expect = 0.55
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 117 DVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIE 176
+VE L + L + EE EEEEEEEE E+ ED + + SG++ +
Sbjct: 290 EVEALTEQL--SEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWR 347
Query: 177 KENLAILEKIRKTQRQ 192
K++ + ++ +R+
Sbjct: 348 KDSPWVKPSRKRRKRE 363
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 37.7 bits (86), Expect = 0.017
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 119 EMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEG 174
E +D + TE++ SEEEEEEEE E+ E+ + E +EE+ SG +S+ G
Sbjct: 281 ERVDSDSKSEVEALTEQL-SEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSG 335
Score = 32.7 bits (73), Expect = 0.55
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 117 DVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIE 176
+VE L + L + EE EEEEEEEE E+ ED + + SG++ +
Sbjct: 290 EVEALTEQL--SEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWR 347
Query: 177 KENLAILEKIRKTQRQ 192
K++ + ++ +R+
Sbjct: 348 KDSPWVKPSRKRRKRE 363
>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
Length = 663
Score = 37.4 bits (85), Expect = 0.022
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 121 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
L P G G ++ SEEE EEEE E++E+ + +EEE + ++ E+E +E+E
Sbjct: 4 LRSPSGFGDPGKKDQKESEEELEEEEEEEEVEEEEEEVEEEEEEV--EEEEEEVVEEE 59
Score = 30.4 bits (67), Expect = 2.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 129 QNGTTEEVTSEEEEEE-EEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKE 178
Q + EE+ EEEEEE EE E++E+ + +EEE + ++ E E E
Sbjct: 18 QKESEEELEEEEEEEEVEEEEEEVEEEEEEVEEEEEEVVEEELVGEEQELE 68
>gi|31543091 MAK16 homolog [Homo sapiens]
Length = 300
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 109 LYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEE----EMAED----------IEDL 154
+YN P H + L+Q + TEE ++++EE+ E ED ED+
Sbjct: 178 IYNFPIHAFDKALEQQEAESDSSDTEEKDDDDDDEEDVGKREFVEDGEVDESDISDFEDM 237
Query: 155 DHYEMKEEEPISGKKSEDEGIEK 177
D + +E GK S +E EK
Sbjct: 238 DKLDASSDEDQDGKSSSEEEEEK 260
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 37.4 bits (85), Expect = 0.022
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 134 EEVTSEE----EEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENLAILEKIRKT 189
+EV EE EEEEEE AED E+ D E ++EE ++ +DEG + A E
Sbjct: 35 KEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE---EEEDDEGPALKRAAEEEDEADP 91
Query: 190 QRQDHLNGA 198
+RQ NGA
Sbjct: 92 KRQKTENGA 100
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,962,684
Number of Sequences: 37866
Number of extensions: 822683
Number of successful extensions: 10031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 5745
Number of HSP's gapped (non-prelim): 2495
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.