Guide to the Human Genome
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Name: FLJ25076 Sequence: fasta or formatted (161aa) NCBI GI: 223555979
Description:

probable ubiquitin-conjugating enzyme E2 FLJ25076

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          9           2
 C cysteine            1.2          2           1
 D aspartate           6.2         10           1
 E glutamate           6.8         11           1
 F phenylalanine       6.2         10           1
 G glycine             5.6          9           2
 H histidine           1.2          2           1
 I isoleucine          3.1          5           1
 K lysine              8.1         13           2
 L leucine             9.9         16           2
 M methionine          3.1          5           1
 N asparagine          3.1          5           1
 P proline             5.0          8           2
 Q glutamine           3.1          5           1
 R arginine            5.6          9           1
 S serine              8.7         14           2
 T threonine           5.0          8           1
 V valine              8.1         13           1
 W tryptophan          2.5          4           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   probable ubiquitin-conjugating enzyme E2 FLJ25076 [... 
UBE2Q1                0.505   ubiquitin-conjugating enzyme E2Q 
UBE2Q2                0.472   ubiquitin-conjugating enzyme E2Q 2 isoform 2 
UBE2Q2                0.472   ubiquitin-conjugating enzyme E2Q 2 isoform 1 
UBE2D2                0.059   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.059   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2C                 0.050   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2D1                0.050   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.050   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2L3                0.043   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2C                 0.043   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.043   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2K                 0.040   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.040   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2D2                0.040   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2L6                0.036   ubiquitin-conjugating enzyme E2L 6 isoform 1 
UBE2R2                0.036   ubiquitin-conjugating enzyme UBC3B 
UBE2A                 0.033   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.033   ubiquitin-conjugating enzyme E2B 
UBE2C                 0.030   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2E3                0.030   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.030   ubiquitin-conjugating enzyme E2E 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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