Guide to the Human Genome
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Name: UBE2Q2 Sequence: fasta or formatted (359aa) NCBI GI: 223890185
Description:

ubiquitin-conjugating enzyme E2Q 2 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [375aa] ubiquitin-conjugating enzyme E2Q 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         13           2
 C cysteine            2.2          8           2
 D aspartate           6.1         22           1
 E glutamate          11.1         40           8
 F phenylalanine       1.9          7           1
 G glycine             5.3         19           3
 H histidine           1.7          6           1
 I isoleucine          5.3         19           1
 K lysine              6.4         23           2
 L leucine            11.7         42           2
 M methionine          2.2          8           1
 N asparagine          4.7         17           3
 P proline             5.3         19           2
 Q glutamine           5.0         18           2
 R arginine            4.2         15           1
 S serine              8.9         32           3
 T threonine           3.3         12           2
 V valine              5.6         20           2
 W tryptophan          1.7          6           1
 Y tyrosine            3.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2Q 2 isoform 2 
UBE2Q2                0.870   ubiquitin-conjugating enzyme E2Q 2 isoform 1 
UBE2Q1                0.672   ubiquitin-conjugating enzyme E2Q 
FLJ25076              0.203   probable ubiquitin-conjugating enzyme E2 FLJ25076 [...
LOC100128108          0.140   PREDICTED: hypothetical protein 
LOC100128108          0.140   PREDICTED: hypothetical protein 
UBE2K                 0.031   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.031   ubiquitin-conjugating enzyme E2K isoform 1 
MYT1L                 0.026   myelin transcription factor 1-like 
TRMT6                 0.024   tRNA methyltransferase 6 
LOC728792             0.024   PREDICTED: hypothetical protein 
PELP1                 0.023   proline, glutamic acid and leucine rich protein 1 [...
ANP32A                0.021   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
C12orf12              0.021   hypothetical protein LOC196477 
CENPB                 0.020   centromere protein B 
MYT1                  0.020   myelin transcription factor 1 
ATRX                  0.020   transcriptional regulator ATRX isoform 2 
ATRX                  0.020   transcriptional regulator ATRX isoform 1 
UBE2W                 0.020   ubiquitin-conjugating enzyme E2W (putative) isoform...
UBE2W                 0.020   ubiquitin-conjugating enzyme E2W (putative) isoform ...
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 1 
HUWE1                 0.018   HECT, UBA and WWE domain containing 1 
POLR1A                0.018   DNA-directed RNA polymerase I A 
LOC100133758          0.018   PREDICTED: hypothetical protein, partial 
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
C3orf44               0.017   hypothetical protein LOC131831 
MAK16                 0.017   MAK16 homolog 
MYST4                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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