Guide to the Human Genome
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Name: UBE2K Sequence: fasta or formatted (157aa) NCBI GI: 163660385
Description:

ubiquitin-conjugating enzyme E2K isoform 2

Referenced in:

Additional Brain Proteins
Ring Finger Proteins
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [149aa] ubiquitin-conjugating enzyme E2K isoform 3
alt prot [200aa] ubiquitin-conjugating enzyme E2K isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         16           3
 C cysteine            0.6          1           1
 D aspartate           5.7          9           2
 E glutamate           8.3         13           2
 F phenylalanine       2.5          4           1
 G glycine             3.2          5           2
 H histidine           0.6          1           1
 I isoleucine          7.6         12           1
 K lysine              6.4         10           1
 L leucine            10.2         16           3
 M methionine          1.3          2           1
 N asparagine          5.1          8           1
 P proline             6.4         10           2
 Q glutamine           4.5          7           1
 R arginine            3.8          6           1
 S serine              5.7          9           2
 T threonine           6.4         10           1
 V valine              7.6         12           2
 W tryptophan          1.9          3           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.927   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2K                 0.472   ubiquitin-conjugating enzyme E2K isoform 3 
UBE2N                 0.322   ubiquitin-conjugating enzyme E2N 
UBE2D4                0.280   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.280   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D2                0.280   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D1                0.273   ubiquitin-conjugating enzyme E2D 1 
UBE2D3                0.266   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D2                0.262   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2T                 0.259   ubiquitin-conjugating enzyme E2T 
UBE2E3                0.255   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.255   ubiquitin-conjugating enzyme E2E 3 
UBE2E2                0.252   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.252   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2E1                0.252   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2NL                0.248   ubiquitin-conjugating enzyme E2N-like 
UBE2S                 0.220   ubiquitin-conjugating enzyme E2S 
UBE2B                 0.217   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.217   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2C                 0.213   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.213   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.213   ubiquitin-conjugating enzyme E2C isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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