Guide to the Human Genome
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Name: UBE2Q2 Sequence: fasta or formatted (375aa) NCBI GI: 29789401
Description:

ubiquitin-conjugating enzyme E2Q 2 isoform 1

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [359aa] ubiquitin-conjugating enzyme E2Q 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         13           1
 C cysteine            1.3          5           1
 D aspartate           5.9         22           1
 E glutamate          10.4         39           8
 F phenylalanine       2.9         11           1
 G glycine             5.3         20           3
 H histidine           2.7         10           1
 I isoleucine          5.6         21           1
 K lysine              6.9         26           2
 L leucine            11.7         44           2
 M methionine          1.9          7           1
 N asparagine          5.1         19           3
 P proline             5.3         20           3
 Q glutamine           5.3         20           2
 R arginine            3.2         12           1
 S serine              8.8         33           3
 T threonine           3.5         13           2
 V valine              5.6         21           2
 W tryptophan          1.6          6           1
 Y tyrosine            3.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2Q 2 isoform 1 
UBE2Q2                0.832   ubiquitin-conjugating enzyme E2Q 2 isoform 2 
UBE2Q1                0.714   ubiquitin-conjugating enzyme E2Q 
FLJ25076              0.194   probable ubiquitin-conjugating enzyme E2 FLJ25076 [...
LOC100128108          0.041   PREDICTED: hypothetical protein 
LOC100128108          0.041   PREDICTED: hypothetical protein 
UBE2K                 0.030   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.030   ubiquitin-conjugating enzyme E2K isoform 1 
MYT1L                 0.024   myelin transcription factor 1-like 
TRMT6                 0.023   tRNA methyltransferase 6 
LOC728792             0.023   PREDICTED: hypothetical protein 
PELP1                 0.022   proline, glutamic acid and leucine rich protein 1 [...
ANP32A                0.020   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
C12orf12              0.020   hypothetical protein LOC196477 
CENPB                 0.019   centromere protein B 
MYT1                  0.019   myelin transcription factor 1 
ATRX                  0.019   transcriptional regulator ATRX isoform 2 
ATRX                  0.019   transcriptional regulator ATRX isoform 1 
UBE2W                 0.019   ubiquitin-conjugating enzyme E2W (putative) isoform...
UBE2W                 0.019   ubiquitin-conjugating enzyme E2W (putative) isoform ...
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 1 
HUWE1                 0.018   HECT, UBA and WWE domain containing 1 
POLR1A                0.018   DNA-directed RNA polymerase I A 
LOC100133758          0.018   PREDICTED: hypothetical protein, partial 
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.018   euchromatic histone-lysine N-methyltransferase 2 is...
C3orf44               0.016   hypothetical protein LOC131831 
MAK16                 0.016   MAK16 homolog 
PTMS                  0.016   parathymosin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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